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DolJOral78_scaffold_3004_9

Organism: DOLJORAL78_KSB3_50_49

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(9756..11687)

Top 3 Functional Annotations

Value Algorithm Source
PAS modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXU0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 450.0
  • Bit_score: 352
  • Evalue 8.50e-94
Sigma-54 interaction domain protein {ECO:0000313|EMBL:GAK56813.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 541.0
  • Bit_score: 650
  • Evalue 2.10e-183
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 328.0
  • Bit_score: 343
  • Evalue 1.50e-91

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Taxonomy

bacterium UASB270 → Bacteria

Sequences

DNA sequence
Length: 1932
GTGCTGACACGAAGAAAAAAACACAGGCCCTGGCTTAAAGGCGAAGCTGAAGCCTTGGCTTTACTCACTCACATTGTGAAGAAACATGAGGATCACCACGAATCTTTAGAGAAAAGCGTCCAGGGACTGGGAGCGCTTATCGGAGACTATACTCACGCAGAAGGGTATGCCGTGTATCGTTTTAATCCCTCCAAAAAGTGCTTTTCTCTGTACACGTCTTACGGTCATGATGAGGTATTCACCTTACAGGCCGAGTTTCACGAGCAAGACATCACGGATTGTACTCTTCAGTTAGAGGAATGTGCAACCATATCGAACATTTCTGAACGACAGGATGCTGGCGACGCCCTACTCCTGAAAGCCTGTATCGAAGCTTCTGTTCACTCGCTTGCCTATGTTCCAATCGTCGTCAACGGCTCGCTTCAAACTGTGCTGTGGTTTGCTGGAAAACAGCAGCATCGCAACTCCGAAGCCGATCGCCAATTTTTTACGATCCTGACGGAACATCTGCGGCTGTGCGAAGAAAAAGCTCTACTCGCCAAGCAATTCGAAGAAGATGTCTCGAACAAAGTCTCCCAACTCCAAGAATCGGAAGAACGTTACAGAGTGCTGATTGAGAACGTAAATGAAATCGTGTTTCAGGCGGATCCAAAGGGGACGATTTTATTTGTCAACCATCGTGTTCAAGACATTCTCGGCTATACACCCGACGAAATAACCGGTACGAACTTTTTCACCCGCGTGATTCCGACGGATCTGGAGGAAGCGAAAGCCGCTTTTCGGCTGACAATGCGCAATGAAAGACCCTTGTCCGGAGAATTCCGGGTCATGCACAAAAACGGCAGGAAGCTCACGATTTCGATTTATACCCGTCCGATTTTTGAAGACGGTCGCCGACCAGTCGGCATGCTTGCGATCGTTCAGGATATGACAACACCCTCAGAGCATCGCCTCCCCGATCGTGACGGCTTACACGAGCTGATCGGCCGTAGCAGAAAGATGCAAGAGATTTACGAACTCATCACCAGCGTGGCAAAAACCGATTCAACAGTACTGATCCACGGGGAGAGCGGGACTGGAAAAGAGCTGATCGCCCAGGCGGTTCATGCGTCGAGTCCTCGTCATAACAAGCCCTTCATTGTCGTCAACTGCGCCGCCTATTCCGAACATTTGCTGGAAAGTGAGTTGTTCGGTCATGAACGCGGGGCTTTTACCGGAGCGCACCGCAGAAAACTCGGACGCTTTGAATTAGCCAAGGGTGGCACAATCTTTCTGGATGAAATCGGCGAAATTCCTCCCCACAGTCAGGTGCTCTTGCTGCGAGTCCTGCAGAATAGAACATTTGAACGCGTTGGAGGAGAAAAAACGCTTGAAACCGATGTTCGAATTGTCGCGGCCACCAATAAAAACCTGGAGCAAGAGATGAAGGCCGGACGCTTTCGCGGCGATTTATATTACCGTCTCAATGTGATTCCAATTGAAGTGCCTCCTCTGCGAGAGCGGAAAGAGGATATTCCCCACCTGGTGGAGCATTTCCGTAAAAAGTATTCTGAGGCGACGCATAAGCAGGTCCTGAACTGTTCGCAAGGGGCTCTTGAAATTCTGATGCGTTACAGCTGGTATGGAAATGTACGGGAACTGGAAAATACGATCGAACGCGCCGTTGTCATGACATCCGGTTCAGTGATCGGCCCGGCTGATTTACCACTCAAACTGCGTCAAGAAAGTGATTTCGAGCTGCAAGAGAGCGCTATATGCGCCGACGAGCCCCCTCCCACGAGCTTATACGAGCATGAAAAAGCCCTGATCAAGAAGACGCTGCAGGCGCTTAAGTGGAATAAGTACCAGGCTGCCAAAGCTCTTGGAATCACCAGAAGTACGTTGTATTCGAAAATTCGCAAATATAAACTCGAGTCCGGCGATGTATCGTGA
PROTEIN sequence
Length: 644
VLTRRKKHRPWLKGEAEALALLTHIVKKHEDHHESLEKSVQGLGALIGDYTHAEGYAVYRFNPSKKCFSLYTSYGHDEVFTLQAEFHEQDITDCTLQLEECATISNISERQDAGDALLLKACIEASVHSLAYVPIVVNGSLQTVLWFAGKQQHRNSEADRQFFTILTEHLRLCEEKALLAKQFEEDVSNKVSQLQESEERYRVLIENVNEIVFQADPKGTILFVNHRVQDILGYTPDEITGTNFFTRVIPTDLEEAKAAFRLTMRNERPLSGEFRVMHKNGRKLTISIYTRPIFEDGRRPVGMLAIVQDMTTPSEHRLPDRDGLHELIGRSRKMQEIYELITSVAKTDSTVLIHGESGTGKELIAQAVHASSPRHNKPFIVVNCAAYSEHLLESELFGHERGAFTGAHRRKLGRFELAKGGTIFLDEIGEIPPHSQVLLLRVLQNRTFERVGGEKTLETDVRIVAATNKNLEQEMKAGRFRGDLYYRLNVIPIEVPPLRERKEDIPHLVEHFRKKYSEATHKQVLNCSQGALEILMRYSWYGNVRELENTIERAVVMTSGSVIGPADLPLKLRQESDFELQESAICADEPPPTSLYEHEKALIKKTLQALKWNKYQAAKALGITRSTLYSKIRKYKLESGDVS*