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DOLJORAL78_Pasteurellales_40_4

In projects: DOLJORAL78

Consensus taxonomy: Pasteurellales → Gammaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: DolJOral78_UNK

Properties

Avg. coverage: 3.88 Longest contig: 8.66 Kbp Bin length: 1.03 Mbp GC content: 39.80 %

Contigs count: 576 Features count: 1133 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 9 / 55 BSCG 8 / 51 ASCG 2 / 38 MC: 1

Displaying items 201-250 of 576 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
DolJOral78_scaffold_93657 Species: Avibacterium paragallinarum (50%)	2	1391 bp	38.32	3.34	60.82
DolJOral78_scaffold_47785 Species: Actinobacillus succinogenes (50%)	2	2267 bp	41.38	3.90	72.12
DolJOral78_scaffold_125108 Species: Aggregatibacter aphrophilus (50%)	2	1122 bp	32.17	2.54	99.47
DolJOral78_scaffold_28179 Species: Actinobacillus pleuropneumoniae (50%)	2	3268 bp	34.85	5.60	99.33
DolJOral78_scaffold_63988 Species: Chelonobacter oris (50%)	2	1838 bp	43.47	4.90	63.00
DolJOral78_scaffold_143838 Species: Gallibacterium anatis (50%)	2	1007 bp	35.35	2.38	57.80
DolJOral78_scaffold_68013 Species: Haemophilus haemolyticus (50%)	2	1758 bp	44.94	2.73	99.15
DolJOral78_scaffold_67159 Species: Mannheimia varigena (50%)	2	1775 bp	42.31	3.21	83.66
DolJOral78_scaffold_106999 Species: Aggregatibacter aphrophilus (50%)	2	1261 bp	43.93	2.26	100.16
DolJOral78_scaffold_69602 Species: Gallibacterium genomosp. 1 (50%)	2	1729 bp	43.84	3.90	94.22
DolJOral78_scaffold_107346 Species: Gallibacterium anatis (50%)	2	1258 bp	40.54	2.27	82.75
DolJOral78_scaffold_143335 Species: Haemophilus aegyptius (50%)	2	1010 bp	37.43	4.46	73.37
DolJOral78_scaffold_70374 Species: Haemophilus parainfluenzae (50%)	2	1716 bp	43.18	3.32	99.48
DolJOral78_scaffold_103590 Species: Actinobacillus minor (50%)	2	1291 bp	37.80	6.97	78.78
DolJOral78_scaffold_58767 Species: Aggregatibacter actinomycetemcomitans (50%)	2	1954 bp	41.56	2.99	99.95
DolJOral78_scaffold_143593 Species: [Haemophilus] parasuis (50%)	2	1009 bp	27.45	3.72	75.22
DolJOral78_scaffold_131393 Species: Haemophilus parahaemolyticus (50%)	2	1080 bp	34.17	3.19	78.33
DolJOral78_scaffold_144066 Species: Mannheimia varigena (50%)	2	1006 bp	38.67	2.98	99.90
DolJOral78_scaffold_82337 Species: Gallibacterium anatis (50%)	2	1530 bp	27.32	2.84	35.29
DolJOral78_scaffold_143596 Species: [Haemophilus] parasuis (50%)	2	1008 bp	38.69	2.53	97.92
DolJOral78_scaffold_29746 Species: Pasteurella multocida (50%)	2	3142 bp	48.41	3.72	80.20
DolJOral78_scaffold_51946 Species: Bibersteinia trehalosi (50%)	2	2137 bp	49.88	4.63	95.46
DolJOral78_scaffold_68283 Species: Haemophilus influenzae (50%)	2	1753 bp	42.78	4.11	99.60
DolJOral78_scaffold_109364 Species: Chelonobacter oris (50%)	2	1240 bp	37.98	2.54	93.63
DolJOral78_scaffold_60589 Species: Actinobacillus pleuropneumoniae (50%)	2	1912 bp	28.35	2.51	67.31
DolJOral78_scaffold_81389 Species: Actinobacillus minor (50%)	2	1544 bp	43.65	4.18	98.51
DolJOral78_scaffold_66471 Species: Bibersteinia trehalosi (50%)	2	1788 bp	32.16	4.53	88.26
DolJOral78_scaffold_128833 Species: Aggregatibacter sp. oral taxon 458 (50%)	2	1096 bp	49.82	3.28	83.76
DolJOral78_scaffold_138769 Species: Bibersteinia trehalosi (100%)	2	1036 bp	30.41	1.45	88.03
DolJOral78_scaffold_56448 Species: Mannheimia haemolytica (50%)	2	2013 bp	39.49	6.86	99.11
DolJOral78_scaffold_81136 Species: Chelonobacter oris (50%)	2	1548 bp	36.50	1.55	95.16
DolJOral78_scaffold_114706 Species: [Haemophilus] parasuis (50%)	2	1197 bp	35.09	2.01	86.22
DolJOral78_scaffold_61817 Species: Haemophilus paraphrohaemolyticus (50%)	2	1883 bp	31.70	2.23	99.89
DolJOral78_scaffold_80185 Species: [Mannheimia] succiniciproducens (100%)	2	1562 bp	47.12	2.50	95.84
DolJOral78_scaffold_68036 Species: [Haemophilus] parasuis (50%)	2	1757 bp	40.87	7.17	74.62
DolJOral78_scaffold_71669 Species: [Haemophilus] parasuis (50%)	2	1950 bp	37.13	5.00	70.00
DolJOral78_scaffold_68295 Species: Aggregatibacter aphrophilus (50%)	2	1753 bp	40.22	3.42	82.83
DolJOral78_scaffold_116911 Species: Gallibacterium anatis (50%)	2	1181 bp	31.92	2.16	86.37
DolJOral78_scaffold_152040 Species: [Haemophilus] parasuis (50%)	2	1282 bp	43.99	4.68	93.60
DolJOral78_scaffold_101296 Species: Actinobacillus succinogenes (50%)	2	1313 bp	40.67	1.83	91.85
DolJOral78_scaffold_58017 Species: Actinobacillus suis (50%)	2	1973 bp	36.90	5.55	58.69
DolJOral78_scaffold_47305 Species: Haemophilus haemolyticus (50%)	2	2283 bp	36.22	2.69	85.02
DolJOral78_scaffold_64154 Species: Aggregatibacter actinomycetemcomitans (50%)	2	1834 bp	41.71	2.37	80.97
DolJOral78_scaffold_73002 Species: Actinobacillus succinogenes (50%)	2	1671 bp	29.08	4.40	78.64
DolJOral78_scaffold_67187 Species: Haemophilus parainfluenzae (50%)	2	1775 bp	50.03	2.37	99.21
DolJOral78_scaffold_103612 Species: Mannheimia haemolytica (50%)	2	1291 bp	31.60	3.95	92.02
DolJOral78_scaffold_114206 Species: Haemophilus haemolyticus (50%)	2	1201 bp	39.97	2.87	96.42
DolJOral78_scaffold_53037 Species: Aggregatibacter actinomycetemcomitans (50%)	2	2104 bp	42.73	2.14	99.81
DolJOral78_scaffold_88229 Species: Mannheimia haemolytica (50%)	2	1455 bp	42.34	1.65	88.66
DolJOral78_scaffold_87830 Species: Gallibacterium genomosp. 2 (50%)	2	1460 bp	36.58	2.47	82.81

Displaying items 201-250 of 576 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (DOLJORAL78_Pasteurellales_40_4) and add all its contigs / scaffolds to the organism you choose below

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DOLJORAL78_Pasteurellales_40_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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