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DolZOral124_scaffold_2855

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2855_1
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..270)
-----------------
DNA (270bp)
protein (90aa)
hypothetical protein n=3 Tax=Spirosoma spitsbergense RepID=UPI0003761F3E
transposase IS110 family
Transposase IS110 family {ECO:0000313|EMBL:CCB69360.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium br
DolZOral124_scaffold_2855_2
Porphyromonas cangingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(617..2191)
-----------------
DNA (1575bp)
protein (525aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN80742.1}; TaxID=36874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cangingivali
RagB/SusD domain-containing protein id=4428075 bin=GWA2_Bacteroidetes_42_15 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
RagB/SusD domain-containing protein
DolZOral124_scaffold_2855_3
Porphyromonas cangingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2206..5574)
-----------------
DNA (3369bp)
protein (1123aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI000365EFE1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN80743.1}; TaxID=36874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cangingivali
TonB-dependent receptor plug
DolZOral124_scaffold_2855_4
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6326..8032)
-----------------
DNA (1707bp)
protein (569aa)
ABC transporter, ATP-binding protein, putative n=1 Tax=Porphyromonas crevioricanis JCM 15906 RepID=T1CN02_9PORP
ABC transporter, ATP-binding protein, putative {ECO:0000313|EMBL:GAD07136.1}; TaxID=1305618 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="P
ABC transporter ATP-binding protein
DolZOral124_scaffold_2855_5
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8046..9761)
-----------------
DNA (1716bp)
protein (572aa)
ABC transporter ATP-binding protein n=1 Tax=Porphyromonas macacae RepID=UPI00037103F5 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGN72497.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas
ABC transporter ATP-binding protein
DolZOral124_scaffold_2855_6
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9976..11241)
-----------------
DNA (1266bp)
protein (422aa)
hypothetical protein n=1 Tax=Porphyromonas gulae RepID=UPI0003627392
Uncharacterized protein {ECO:0000313|EMBL:KGN90542.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
hypothetical protein
DolZOral124_scaffold_2855_7
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11241..12038)
-----------------
DNA (798bp)
protein (266aa)
Uncharacterized protein n=9 Tax=Porphyromonas gingivalis RepID=F5XAH8_PORGT
Uncharacterized protein {ECO:0000313|EMBL:KGN72499.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
hypothetical protein
DolZOral124_scaffold_2855_8
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12286..14649)
-----------------
DNA (2364bp)
protein (788aa)
membrane protein n=1 Tax=Porphyromonas macacae RepID=UPI0003648F10
Membrane protein {ECO:0000313|EMBL:KGN72502.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
hypothetical protein
DolZOral124_scaffold_2855_9
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14675..15295)
-----------------
DNA (621bp)
protein (207aa)
UPI0003D1B781 related cluster n=1 Tax=unknown RepID=UPI0003D1B781
TetR family transcriptional regulator {ECO:0000313|EMBL:ETA26094.1}; TaxID=1211023 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromo
TetR family transcriptional regulator
DolZOral124_scaffold_2855_10
unknown

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15563..15685
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

DolZOral124_scaffold_2855_11
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15658..18141)
-----------------
DNA (2484bp)
protein (828aa)
TonB-dependent receptor plug domain protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5TXV5_9PORP rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGN84321.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
TonB-dependent receptor
DolZOral124_scaffold_2855_12
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(18390..20150)
-----------------
DNA (1761bp)
protein (587aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2KBM7_9PORP rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KGN86481.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-2
DolZOral124_scaffold_2855_13
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20412..21743
-----------------
DNA (1332bp)
protein (444aa)
Uncharacterized protein n=2 Tax=Porphyromonas gingivalis RepID=U2I4W2_PORGN
Uncharacterized protein {ECO:0000313|EMBL:KGN85185.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_2855_14
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21918..24764
-----------------
DNA (2847bp)
protein (949aa)
Excinuclease ABC, A subunit n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K5H2_9PORP
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-
uvrA-1; excinuclease ABC subunit A
DolZOral124_scaffold_2855_15
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24770..25756
-----------------
DNA (987bp)
protein (329aa)
SWIM zinc finger domain protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NC36_9PORP
SWIM zinc finger domain protein {ECO:0000313|EMBL:KGN85183.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp
hypothetical protein
DolZOral124_scaffold_2855_16
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25737..26186
-----------------
DNA (450bp)
protein (150aa)
SWIM zinc finger domain protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NC36_9PORP
SWIM zinc finger domain protein {ECO:0000313|EMBL:KGN85183.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp
hypothetical protein
DolZOral124_scaffold_2855_17
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26199..28577
-----------------
DNA (2379bp)
protein (793aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromona
UvrD/REP helicase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NCK5_9PORP
UvrD/PcrA/Rep family ATP-dependent DNA helicase
DolZOral124_scaffold_2855_18
unknown

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28888..29142
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

DolZOral124_scaffold_2855_19
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29489..31723
-----------------
DNA (2235bp)
protein (745aa)
TonB-dependent receptor n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K548_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:KGN83165.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
TonB-dependent receptor
DolZOral124_scaffold_2855_20
unknown

Not on your lists

comp(31857..32330)
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

DolZOral124_scaffold_2855_21
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32555..34657
-----------------
DNA (2103bp)
protein (701aa)
ATP-dependent DNA helicase RecG n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NJ42_9PORP
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KGN83476.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp
recG; ATP-dependent DNA helicase RecG
DolZOral124_scaffold_2855_22
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34908..36608)
-----------------
DNA (1701bp)
protein (567aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN85563.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
DolZOral124_scaffold_2855_23
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36641..37630)
-----------------
DNA (990bp)
protein (330aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadacea
tRNA-dihydrouridine synthase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GUM6_9PORP
NifR3 family TIM-barrel protein
DolZOral124_scaffold_2855_24
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37688..38680)
-----------------
DNA (993bp)
protein (331aa)
Probable endonuclease n=3 Tax=Haemophilus influenzae RepID=A9YRX9_HAEIF rbh
hypothetical protein rbh
Probable endonuclease {ECO:0000313|EMBL:ABY16694.1}; TaxID=727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae.;"
DolZOral124_scaffold_2855_25
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38685..39953)
-----------------
DNA (1269bp)
protein (423aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavo
DNA-cytosine methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Moraxella catarrhalis O35E RepID=F1XHK6_MORCA
DolZOral124_scaffold_2855_26
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40014..40799)
-----------------
DNA (786bp)
protein (262aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581}; Short=Malonyl-ACP O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835};; EC=2.1.1.
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00037D5431
biotin synthesis protein BioC
DolZOral124_scaffold_2855_27
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40799..41500)
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein n=2 Tax=Porphyromonas gingivalis RepID=F5X939_PORGT
Uncharacterized protein {ECO:0000313|EMBL:KGN84485.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_2855_28
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41596..43065)
-----------------
DNA (1470bp)
protein (490aa)
Transglycosylase SLT domain protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NC87_9PORP
Transglycosylase {ECO:0000313|EMBL:KGN81886.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860
exported transglycosylase protein
DolZOral124_scaffold_2855_29
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43400..44797
-----------------
DNA (1398bp)
protein (466aa)
Outer membrane efflux protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NB02_9PORP
Transporter {ECO:0000313|EMBL:KGN84005.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
outer membrane efflux protein
DolZOral124_scaffold_2855_30
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45109..46146
-----------------
DNA (1038bp)
protein (346aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NBP2_9PORP
RND transporter MFP subunit {ECO:0000313|EMBL:KGN84004.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. CO
cation efflux system protein
Displaying items 1-30 of 31 in total

View Taxonomy