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DolZOral124_scaffold_1002

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1002_1

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139..840
-----------------
DNA (702bp)
protein (234aa)
PTS system, fructose-specific IIA/IIB/IIC component (EC:2.7.1.69)
PTS system, fructose-specific IIA/ IIB/ IIC component n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WLG8_9SPIO
Uncharacterized protein {ECO:0000313|EMBL:KKL23964.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DolZOral124_scaffold_1002_2
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

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866..1678
-----------------
DNA (813bp)
protein (271aa)
ptsN; PTS system transporter subunit IIA (EC:2.7.-.-); K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PTS system, fructose-specific IIABC component (EC:2.7.1.69)
PTS system, fructose-specific IIABC component n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WNS7_9SPIO
DolZOral124_scaffold_1002_3
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1688..2926
-----------------
DNA (1239bp)
protein (413aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-O17 RepID=UPI00037F2F0B
hypothetical protein
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC16745.1}; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispi
DolZOral124_scaffold_1002_4
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3087..4889
-----------------
DNA (1803bp)
protein (601aa)
Trypsin-like peptidase domain protein n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U1FM34_TRESO
Trypsin-like peptidase domain protein {ECO:0000313|EMBL:ERF60496.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. so
hypothetical protein
DolZOral124_scaffold_1002_5
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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5060..5797
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QVE4_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV30459.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorp
DolZOral124_scaffold_1002_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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5794..8109
-----------------
DNA (2316bp)
protein (772aa)
Putative RND superfamily exporter n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QS43_SPHPG
putative RND superfamily exporter Tax=RBG_16_Spirochaete_67_19_curated
putative RND superfamily exporter
DolZOral124_scaffold_1002_7
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(8100..9395)
-----------------
DNA (1296bp)
protein (432aa)
CBS domain containing protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R976_SPISS
CBS domain containing protein
Tax=BJP_IG2069_Spirochaetales_48_31
DolZOral124_scaffold_1002_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9496..10710
-----------------
DNA (1215bp)
protein (405aa)
Aldo/keto reductase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTK9_METAC
Aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AKB53278.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barke
DolZOral124_scaffold_1002_9
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10745..11992)
-----------------
DNA (1248bp)
protein (416aa)
Uracil permease n=4 Tax=Finegoldia magna RepID=B0S293_FINM2
uracil transporter
Putative permease {ECO:0000313|EMBL:EFL53595.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
DolZOral124_scaffold_1002_10
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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12072..12614
-----------------
DNA (543bp)
protein (181aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Leptospira interrogans str. HAI1536 RepID=M6VWR1_LEPIR
msrA; protein-methionine-S-oxide reductase
DolZOral124_scaffold_1002_11
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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12750..14531
-----------------
DNA (1782bp)
protein (594aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
dihydroxy-acid dehydratase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D7F5
dihydroxy-acid dehydratase
DolZOral124_scaffold_1002_12
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(14537..15484)
-----------------
DNA (948bp)
protein (316aa)
Putative adenylate/guanylate cyclase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RCR6_SPISS
adenylate/guanylate cyclase
Putative adenylate/guanylate cyclase {ECO:0000313|EMBL:ADK80146.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strai
DolZOral124_scaffold_1002_13
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(15739..16407)
-----------------
DNA (669bp)
protein (223aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SNS8_PLABD
DtxR family iron (metal) dependent repressor
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ADY58964.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" sourc
DolZOral124_scaffold_1002_14
Caldithrix abyssi, Caldithrix, Bacteria

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comp(16404..17519)
-----------------
DNA (1116bp)
protein (372aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00035CDE75
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHO41386.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
ABC transporter
DolZOral124_scaffold_1002_15
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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comp(17516..18631)
-----------------
DNA (1116bp)
protein (372aa)
ABC transporter; K11708 manganese/zinc/iron transport system permease protein Tax=RBG_13_Caldithrix_44_9_curated
ABC-type transporter, integral membrane subunit id=3551991 bin=GWC2_Proteo_65_14_Ab886 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ABC transporter
DolZOral124_scaffold_1002_16
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18628..19389)
-----------------
DNA (762bp)
protein (254aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000382C736
putative manganese ABC transporter ATP-binding protein; K11710 manganese/zinc/iron transport system ATP- binding protein Tax=GWC2_Deltaproteobacteria_65_14_curated
ABC transporter
DolZOral124_scaffold_1002_17
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(19449..20369)
-----------------
DNA (921bp)
protein (307aa)
Putative manganese ABC transporter substrate binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I624_CALAS rbh
putative manganese ABC transporter substrate binding protein
Putative manganese ABC transporter substrate binding protein {ECO:0000313|EMBL:BAM00712.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" sourc
DolZOral124_scaffold_1002_18
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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20412..21086
-----------------
DNA (675bp)
protein (225aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1329640 species="Bacteria; Spirochaetes; Spirocha
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RQP7_SPITD
DolZOral124_scaffold_1002_19
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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21076..22131
-----------------
DNA (1056bp)
protein (352aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F393_SPICH rbh
DolZOral124_scaffold_1002_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22229..22393)
-----------------
DNA (165bp)
protein (55aa)
Rubredoxin n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZG5_9FIRM
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Rubredoxin
DolZOral124_scaffold_1002_21
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(22430..22930)
-----------------
DNA (501bp)
protein (167aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochae
ferritin n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00038150C9
ferritin
DolZOral124_scaffold_1002_22
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(23148..24896)
-----------------
DNA (1749bp)
protein (583aa)
Ferredoxin {ECO:0000313|EMBL:KGM38388.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
NAD(P)-dependent iron-only hydrogenase catalytic subunit
NAD(P)-dependent iron-only hydrogenase catalytic subunit id=2887117 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
DolZOral124_scaffold_1002_23
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(24916..26700)
-----------------
DNA (1785bp)
protein (595aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9ULP6_SPIAZ
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit {ECO:0000313|EMBL:AFG38439.1}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spiroc
DolZOral124_scaffold_1002_24
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

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comp(26704..27096)
-----------------
DNA (393bp)
protein (131aa)
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein Tax=GWF1_Spirochaetes_49_6_curated
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein id=2488465 bin=GWF1_Xanthomonadales_69_6 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein
DolZOral124_scaffold_1002_25
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(27111..27668)
-----------------
DNA (558bp)
protein (186aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Sp
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003788136
histidine kinase
DolZOral124_scaffold_1002_26
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(27668..28171)
-----------------
DNA (504bp)
protein (168aa)
NADH-quinone oxidoreductase, E subunit n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7S2_SPISS
NADH-quinone oxidoreductase subunit E
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:ADK82777.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (str
DolZOral124_scaffold_1002_27
Spirochaeta sp. JC230, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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28305..28976
-----------------
DNA (672bp)
protein (224aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000378E5D4
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC
Redox-sensitive transcriptional regulator, AT-rich DNA-binding protein
DolZOral124_scaffold_1002_28
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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28987..29319
-----------------
DNA (333bp)
protein (111aa)
hypothetical protein
Putative uncharacterized protein id=3148693 bin=GWA1_Treponema_62_8 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein Tax=GWC1_Treponema_61_84_curated
DolZOral124_scaffold_1002_29
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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29323..30045
-----------------
DNA (723bp)
protein (241aa)
PHP domain protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LMY1_TREBD
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:AEE15767.1}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 10
DolZOral124_scaffold_1002_30
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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30155..31966
-----------------
DNA (1812bp)
protein (604aa)
Oligoendopeptidase F n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EYT0_SPICH rbh
oligoendopeptidase F
Oligoendopeptidase F {ECO:0000313|EMBL:AEJ18876.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 733
Displaying items 1-30 of 42 in total

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