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DolZOral124_scaffold_1015

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1015_1
Peptostreptococcus stomatis, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1427)
-----------------
DNA (1425bp)
protein (475aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFM64409.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFM64409.1};; TaxID=596315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E3R2_9FIRM rbh
Fusion of rumA/CD3393 and CD1844A
DolZOral124_scaffold_1015_2
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1473..1910)
-----------------
DNA (438bp)
protein (146aa)
NifU n=3 Tax=Clostridium acetobutylicum RepID=F0K8V0_CLOAE
NifU-like protein involved in Fe-S cluster formation
NifU homolog involved in Fe-S cluster formation {ECO:0000313|EMBL:AAK81226.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
DolZOral124_scaffold_1015_3
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1903..3093)
-----------------
DNA (1191bp)
protein (397aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1293054 species="Bacteria; Firmic
Cysteine desulfurase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5EG52_9FIRM
DolZOral124_scaffold_1015_4
Leptotrichia buccalis, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(3062..4063)
-----------------
DNA (1002bp)
protein (334aa)
SufBD protein n=1 Tax=Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) RepID=C7NEP4_LEPBD
SufBD protein
SufBD protein {ECO:0000313|EMBL:ACV38405.1}; TaxID=523794 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia buccalis (strain ATCC 14201 / DSM 113
DolZOral124_scaffold_1015_5
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(4072..5475)
-----------------
DNA (1404bp)
protein (468aa)
FeS assembly protein SufB n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2RFS7_9FUSO
FeS assembly protein SufB {ECO:0000313|EMBL:ERK67701.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str.
FeS assembly protein SufB
DolZOral124_scaffold_1015_6
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5468..6217)
-----------------
DNA (750bp)
protein (250aa)
FeS assembly ATPase SufC n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TEA3_9FIRM
FeS assembly ATPase SufC {ECO:0000313|EMBL:EGL35863.1}; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 110 str
Iron-regulated ABC transporter ATPase subunit SufC
DolZOral124_scaffold_1015_7
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6540..7649
-----------------
DNA (1110bp)
protein (370aa)
Exonuclease SbcCD, D subunit n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWZ0_9FIRM
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EHO51372.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 s
sbcD; exonuclease SbcD
DolZOral124_scaffold_1015_8
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7650..10382
-----------------
DNA (2733bp)
protein (911aa)
AAA domain / putative exonuclease SbcCD, C subunit multi-domain protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R8K6_9FIRM
AAA domain / putative exonuclease SbcCD, C subunit multi-domain protein {ECO:0000313|EMBL:EIC96014.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoan
sbcC; exonuclease SbcC
DolZOral124_scaffold_1015_9
unknown

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comp(10426..12918)
-----------------
DNA (2493bp)
protein (831aa)

This feature has no annotations

DolZOral124_scaffold_1015_10
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12923..13783)
-----------------
DNA (861bp)
protein (287aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B5D042
Uncharacterized protein {ECO:0000313|EMBL:KGG81444.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
DolZOral124_scaffold_1015_11
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13788..15044)
-----------------
DNA (1257bp)
protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JX91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KDR93818.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
hypothetical protein
DolZOral124_scaffold_1015_12
unknown

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comp(15044..15643)
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

DolZOral124_scaffold_1015_13
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15643..16731)
-----------------
DNA (1089bp)
protein (363aa)
Type IV pilus assembly protein PilM n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TIM4_9CLOT
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:KDR93816.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridi
fimbrial assembly protein
DolZOral124_scaffold_1015_14
unknown

Not on your lists

comp(16740..17318)
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

DolZOral124_scaffold_1015_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17327..18067)
-----------------
DNA (741bp)
protein (247aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=121506
Type 4 prepilin-like proteins leader peptide-processing enzyme n=6 Tax=Clostridium difficile RepID=D5PZK9_CLODI
type IV prepilin leader peptidase
DolZOral124_scaffold_1015_16
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18067..18465)
-----------------
DNA (399bp)
protein (133aa)
Tfp pilus assembly protein PilE-like protein protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TQ93_THETC
Tfp pilus assembly protein PilE-like protein
Tfp pilus assembly protein PilE-like protein protein {ECO:0000313|EMBL:ADL68794.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. I
DolZOral124_scaffold_1015_17
unknown

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comp(18478..18912)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

DolZOral124_scaffold_1015_18
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19054..19566)
-----------------
DNA (513bp)
protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q841_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK32349.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
DolZOral124_scaffold_1015_19
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19711..20139)
-----------------
DNA (429bp)
protein (143aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RL02_9FIRM
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:CDC43736.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environ
prepilin-type N-terminal cleavage/methylation domain
DolZOral124_scaffold_1015_20
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20209..21414)
-----------------
DNA (1206bp)
protein (402aa)
Type II secretion system protein n=4 Tax=Thermoanaerobacter RepID=B0K0R8_THEPX
Type 4 fimbrial assembly protein PilC {ECO:0000313|EMBL:KDR93811.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostri
xpsF; general secretion pathway protein F
DolZOral124_scaffold_1015_21
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21425..22477)
-----------------
DNA (1053bp)
protein (351aa)
Twitching motility protein PilT n=1 Tax=Caloramator australicus RC3 RepID=I7LKP4_9CLOT
Twitching motility protein PilT {ECO:0000313|EMBL:CCJ34615.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3
pilT; twitching mobility protein PilT
DolZOral124_scaffold_1015_22
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22478..24169)
-----------------
DNA (1692bp)
protein (564aa)
Type IV fimbrial assembly, ATPase PilB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASI6_9CLOT
Type IV fimbrial assembly, ATPase PilB {ECO:0000313|EMBL:EOD00113.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisaliniba
xcpR; general secretion pathway protein E
DolZOral124_scaffold_1015_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24855..25901
-----------------
DNA (1047bp)
protein (349aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00127.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
DolZOral124_scaffold_1015_24
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

26143..27363
-----------------
DNA (1221bp)
protein (407aa)
Uncharacterized protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VCW6_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERT69562.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
uracil-xanthine permease
DolZOral124_scaffold_1015_25
Mollicutes bacterium HR2, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(27431..28213)
-----------------
DNA (783bp)
protein (261aa)
Putative Transglutaminase-like enzyme, cysteine protease n=1 Tax=Clostridium ultunense Esp RepID=M1Z1T3_9CLOT
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KFZ25985.1}; TaxID=1541960 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR2.;"
putative Transglutaminase-like enzyme, cysteine protease
DolZOral124_scaffold_1015_26
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28598..29719)
-----------------
DNA (1122bp)
protein (374aa)
Chaperone protein DnaJ n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MG52_ALKOO
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain
DolZOral124_scaffold_1015_27
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29740..31557)
-----------------
DNA (1818bp)
protein (606aa)
dnaK; molecular chaperone DnaK (EC:1.3.1.74)
Chaperone protein DnaK n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPI9_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
DolZOral124_scaffold_1015_28
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31573..32085)
-----------------
DNA (513bp)
protein (171aa)
Protein GrpE n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XFK6_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
GrpE protein HSP-70 cofactor
DolZOral124_scaffold_1015_29
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32097..33125)
-----------------
DNA (1029bp)
protein (343aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFX2_9CLOT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
hrcA; heat-inducible transcription repressor HrcA
DolZOral124_scaffold_1015_30
unknown

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comp(33306..33629)
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

View Taxonomy