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DolZOral124_scaffold_1035

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1035_31
unknown

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comp(34162..34518)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

DolZOral124_scaffold_1035_32
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(34808..36193)
-----------------
DNA (1386bp)
protein (462aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1472719 species="Bacteria; Firm
fumarate hydratase n=1 Tax=Salsuginibacillus kocurii RepID=UPI00038070D3
fumarate hydratase
DolZOral124_scaffold_1035_33
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36546..37136
-----------------
DNA (591bp)
protein (197aa)
TetR family transcriptional regulator n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EZR8_CLOSG
TetR family transcriptional regulator {ECO:0000313|EMBL:EHN15455.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogen
TetR family transcriptional regulator
DolZOral124_scaffold_1035_34
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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37168..39276
-----------------
DNA (2109bp)
protein (703aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9X061_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL15566.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
antibiotic ABC transporter permease
DolZOral124_scaffold_1035_35
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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39257..41806
-----------------
DNA (2550bp)
protein (850aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9X062_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL15567.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
hypothetical protein
DolZOral124_scaffold_1035_36
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

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41943..43169
-----------------
DNA (1227bp)
protein (409aa)
III protein, CoA-transferase family n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JTU3_9FIRM
III protein, CoA-transferase family {ECO:0000313|EMBL:ERJ83245.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacter
hypothetical protein
DolZOral124_scaffold_1035_37
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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43304..44632
-----------------
DNA (1329bp)
protein (443aa)
NADH oxidase n=1 Tax=Clostridium sp. BL8 RepID=T0N9C0_9CLOT
NADH oxidase {ECO:0000313|EMBL:KGK85949.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
NADH oxidase
DolZOral124_scaffold_1035_38
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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45169..46755
-----------------
DNA (1587bp)
protein (529aa)
Diguanylate cyclase (GGDEF) domain protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DA21_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEG51821.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridi
diguanylate cyclase/phosphodiesterase
DolZOral124_scaffold_1035_39
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46838..48910
-----------------
DNA (2073bp)
protein (691aa)
Translation elongation factor G-related protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWW6_9CLOT
Translation elongation factor G-related protein {ECO:0000313|EMBL:EOD01142.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Cald
translation elongation factor G
DolZOral124_scaffold_1035_40
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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49034..50413
-----------------
DNA (1380bp)
protein (460aa)
DNA repair protein RadA n=1 Tax=Bacillus endophyticus RepID=UPI0002F3D07C
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensi
DNA repair protein RadA
DolZOral124_scaffold_1035_41
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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50663..51145
-----------------
DNA (483bp)
protein (161aa)
Ribosome maturation factor RimP n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=RIMP_ALKMQ
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
hypothetical protein
DolZOral124_scaffold_1035_42
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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51158..52315
-----------------
DNA (1158bp)
protein (386aa)
NusA antitermination factor n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CW70_HALOH
NusA antitermination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;"
DolZOral124_scaffold_1035_43
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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52336..52605
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4ZJG0_PAEAL
Nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:KJF25925.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
hypothetical protein
DolZOral124_scaffold_1035_44
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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52598..52912
-----------------
DNA (315bp)
protein (105aa)
ribosomal protein L7Ae n=1 Tax=Blautia producta RepID=UPI0003779DED
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein {ECO:0000313|EMBL:CDD71696.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
DolZOral124_scaffold_1035_45
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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52929..55247
-----------------
DNA (2319bp)
protein (773aa)
Translation initiation factor IF-2 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GRX2_FILAD
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaero
translation initiation factor IF-2
DolZOral124_scaffold_1035_46
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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55267..55677
-----------------
DNA (411bp)
protein (137aa)
Ribosome-binding factor A n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZ68_CLOA9
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / D
DolZOral124_scaffold_1035_47
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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55670..56644
-----------------
DNA (975bp)
protein (325aa)
DHHA1 domain protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTC9_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EGS30042.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 s
RecJ-like phosphoesterase domain-containing protein
DolZOral124_scaffold_1035_48
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56697..57749
-----------------
DNA (1053bp)
protein (351aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Clostridium difficile CD160 RepID=T3DG96_CLODI
truB; tRNA pseudouridine synthase B
DolZOral124_scaffold_1035_49

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57752..58681
-----------------
DNA (930bp)
protein (310aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=77133 species="Bacteria; environmental
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F657_9BACT
riboflavin kinase/FMN adenylyltransferase
DolZOral124_scaffold_1035_50
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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58885..59148
-----------------
DNA (264bp)
protein (88aa)
30S ribosomal protein S15 n=1 Tax=Mogibacterium sp. CM50 RepID=J5U2M5_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" sourc
30S ribosomal protein S15
DolZOral124_scaffold_1035_51
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59285..61438
-----------------
DNA (2154bp)
protein (718aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=84022
pnp; polyribonucleotide nucleotidyltransferase Pnp (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T913_THEIA
DolZOral124_scaffold_1035_52
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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61517..61948
-----------------
DNA (432bp)
protein (144aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000255|HAMAP-Rule:MF_00116}; Short=dUTPase {ECO:0000255|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000255|HAMAP-Rule:MF_00116};; dUTP pyrophosphata
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=DUT_FINM2
deoxyuridine 5'-triphosphate nucleotidohydrolase
DolZOral124_scaffold_1035_53
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61929..63158
-----------------
DNA (1230bp)
protein (410aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;"
LysC; aspartate kinase (EC:2.7.2.4)
Aspartate kinase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CTV0_THEYO
DolZOral124_scaffold_1035_54
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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63188..66610
-----------------
DNA (3423bp)
protein (1141aa)
FtsK/SpoIIIE family protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5LP33_9CLOT
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:CCY80943.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostri
ftsK; DNA translocase FtsK
DolZOral124_scaffold_1035_55
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66600..68003
-----------------
DNA (1404bp)
protein (468aa)
rimO; ribosomal protein S12 methylthiotransferase RimO (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXK5_CLOA9
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
DolZOral124_scaffold_1035_56
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68026..68616
-----------------
DNA (591bp)
protein (197aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBX2_9FIRM
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CCZ78272.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; en
DolZOral124_scaffold_1035_57
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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68650..70620
-----------------
DNA (1971bp)
protein (657aa)
Methyl-accepting chemotaxis protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F4W8_DESDL
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGA67711.1}; Flags: Precursor;; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" sourc
DolZOral124_scaffold_1035_58
Selenomonas sp. CM52, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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70724..72214
-----------------
DNA (1491bp)
protein (497aa)
PAS domain protein n=1 Tax=Selenomonas sp. CM52 RepID=J5XMT6_9FIRM
PAS domain protein {ECO:0000313|EMBL:EJU30462.1}; TaxID=936381 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. CM52.;"
methyl-accepting chemotaxis sensory transducer
DolZOral124_scaffold_1035_59
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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72231..73271
-----------------
DNA (1041bp)
protein (347aa)
Protein RecA n=1 Tax=Clostridium ultunense Esp RepID=M1ZGX9_9CLOT rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1288971 species="Bacteria; Firmicut
recA protein
DolZOral124_scaffold_1035_60
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

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73422..74729
-----------------
DNA (1308bp)
protein (436aa)
SPFH domain-band 7 family protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J5ULA6_9FIRM
SPFH domain-band 7 family protein {ECO:0000313|EMBL:EJU23414.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium
virion core protein (lumpy skin disease virus)
Displaying items 31-60 of 62 in total

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