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DolZOral124_scaffold_1083

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1083_1
Snodgrassella alvi, Snodgrassella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..9636)
-----------------
DNA (9636bp)
protein (3212aa)
Filamentous hemagglutinin family domain protein (Fragment) n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZBQ7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ01542.1}; Flags: Fragment;; TaxID=1385367 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella.;" source="Snod
Large exoprotein involved in heme utilizationor adhesion
DolZOral124_scaffold_1083_2
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9826..11610)
-----------------
DNA (1785bp)
protein (595aa)
POTRA domain protein, ShlB-type n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZBQ6_9GAMM
POTRA domain protein, ShlB-type {ECO:0000313|EMBL:EHM56019.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Ca
Channel-forming transporter/cytolysins activator of TpsB family
DolZOral124_scaffold_1083_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11838..12749
-----------------
DNA (912bp)
protein (304aa)
Geranyltranstransferase {ECO:0000313|EMBL:KGJ87148.1}; EC=2.5.1.10 {ECO:0000313|EMBL:KGJ87148.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; C
ispA; geranyltranstransferase (EC:2.5.1.10)
geranyltranstransferase n=1 Tax=Colwellia piezophila RepID=UPI00036DF60F
DolZOral124_scaffold_1083_4
unknown

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comp(12666..12911)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

DolZOral124_scaffold_1083_5
unknown

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12965..13207
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

DolZOral124_scaffold_1083_6
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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13261..14010
-----------------
DNA (750bp)
protein (250aa)
Permease n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KK46_9GAMM
Permease {ECO:0000313|EMBL:EPC00803.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM
protein of unknown function DUF81
DolZOral124_scaffold_1083_7
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14519..16591
-----------------
DNA (2073bp)
protein (691aa)
Phosphate acetyltransferase {ECO:0000256|PIRNR:PIRNR006107}; EC=2.3.1.8 {ECO:0000256|PIRNR:PIRNR006107};; Phosphotransacetylase {ECO:0000256|PIRNR:PIRNR006107}; TaxID=638300 species="Bacteria; Proteob
pta; phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9Q0_9GAMM
DolZOral124_scaffold_1083_8
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16679..17686
-----------------
DNA (1008bp)
protein (336aa)
Putative ABC transporter, periplasmic iron-compound-binding protein n=1 Tax=Photobacterium angustum (strain S14 / CCUG 15956) RepID=Q1ZNI7_PHOAS
iron ABC transporter substrate-binding protein
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIL32594.1}; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" source="B
DolZOral124_scaffold_1083_9
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17989..19623
-----------------
DNA (1635bp)
protein (545aa)
Iron(III) ABC transporter permease n=1 Tax=Aeromonas molluscorum 848 RepID=R1GRW9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL32595.1}; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" source="Basilea psittacipulmonis
DolZOral124_scaffold_1083_10
Aliivibrio fischeri, Aliivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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19616..20677
-----------------
DNA (1062bp)
protein (354aa)
Fe(3+) ions import ATP-binding protein FbpC 2 (EC:3.6.3.30)
Fe(3+) ions import ATP-binding protein FbpC 2 {ECO:0000313|EMBL:ACH66438.1}; EC=3.6.3.30 {ECO:0000313|EMBL:ACH66438.1};; TaxID=388396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionale
ABC transporter n=1 Tax=Enterovibrio norvegicus RepID=UPI0002E95D63
DolZOral124_scaffold_1083_11
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21246..21743)
-----------------
DNA (498bp)
protein (166aa)
rRNA methylase-family protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QEU5_DESAH
rRNA methylase-family protein
rRNA methylase-family protein {ECO:0000313|EMBL:ACN15437.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Des
DolZOral124_scaffold_1083_12
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21921..24638)
-----------------
DNA (2718bp)
protein (906aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae;
DNA polymerase n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZCU4_9GAMM
polI; DNA polymerase I
DolZOral124_scaffold_1083_13
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25020..26144)
-----------------
DNA (1125bp)
protein (375aa)
purK; phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EWU4_DICNV
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
DolZOral124_scaffold_1083_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26328..27365
-----------------
DNA (1038bp)
protein (346aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alterom
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Agarivorans albus MKT 106 RepID=R9PLK9_AGAAL
rsgA; ribosome-associated GTPase
DolZOral124_scaffold_1083_15
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27355..27600
-----------------
DNA (246bp)
protein (82aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
exodeoxyribonuclease VII small subunit n=1 Tax=Legionella shakespearei RepID=UPI00035C95F7
exodeoxyribonuclease 7 small subunit
DolZOral124_scaffold_1083_16
Photobacterium damselae, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28165..28908)
-----------------
DNA (744bp)
protein (248aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YWI2_LISDA
tRNA (guanine-N(7)-)-methyltransferase
DolZOral124_scaffold_1083_17
Photobacterium damselae, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28974..29879)
-----------------
DNA (906bp)
protein (302aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=2 Tax=Photobacterium damselae RepID=D0Z0U1_LISDA
diaminopimelate epimerase
DolZOral124_scaffold_1083_18
Pseudoalteromonas marina, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29911..30624)
-----------------
DNA (714bp)
protein (238aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas marina mano4 RepID=U1KZB8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG26016.1}; TaxID=1117316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
hypothetical protein
DolZOral124_scaffold_1083_19
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30645..31823)
-----------------
DNA (1179bp)
protein (393aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000381326A rbh
Inner membrane protein YdcO {ECO:0000313|EMBL:CDZ75971.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massili
benE; benzoate transporter permease
DolZOral124_scaffold_1083_20
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31858..33450)
-----------------
DNA (1593bp)
protein (531aa)
Peptide chain release factor 3 n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9Y5_9GAMM rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=638300 species="Bacteria; Proteobacteria; Gammapro
prfC; peptide chain release factor 3
DolZOral124_scaffold_1083_21
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33802..34779)
-----------------
DNA (978bp)
protein (326aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; TaxID=638300 species="Bacteria; Pr
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6A5_9GAMM
DolZOral124_scaffold_1083_22
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34948..35727)
-----------------
DNA (780bp)
protein (260aa)
Exodeoxyribonuclease III n=1 Tax=Spiribacter salinus M19-40 RepID=R4V2X0_9GAMM
exodeoxyribonuclease III
Exodeoxyribonuclease III {ECO:0000313|EMBL:AGM40354.1}; TaxID=1260251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter s
DolZOral124_scaffold_1083_23
unknown

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35934..36170
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

DolZOral124_scaffold_1083_24
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(36385..37554)
-----------------
DNA (1170bp)
protein (390aa)
Uncharacterized protein n=2 Tax=Sulfitobacter RepID=A3SEU7_9RHOB
Transporter {ECO:0000313|EMBL:KFC25640.1}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp. CB2047.;"
hemolysin D
DolZOral124_scaffold_1083_25
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37554..39719)
-----------------
DNA (2166bp)
protein (722aa)
ABC transporter ATP-binding/permease (EC:3.6.3.-)
Probable ATP-binding/permease fusion ABC transporter n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQH5_9RHOB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEJ89869.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sul
DolZOral124_scaffold_1083_26
unknown

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comp(39858..41591)
-----------------
DNA (1734bp)
protein (578aa)

This feature has no annotations

DolZOral124_scaffold_1083_27
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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42675..44009
-----------------
DNA (1335bp)
protein (445aa)
Site-specific recombinase, phage integrase family n=1 Tax=Haemophilus parainfluenzae HK2019 RepID=I3BK84_HAEPA rbh
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EIJ31777.1}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" s
phage integrase family protein
Displaying 27 items

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