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DolZOral124_scaffold_1084

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1084_1
unknown

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2..187
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

DolZOral124_scaffold_1084_2
RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(280..573)
-----------------
DNA (294bp)
protein (98aa)
Excinuclease ABC subunit C domain-containing protein; K07461 putative endonuclease Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated
Excinuclease ABC C subunit domain protein id=3572712 bin=GWF2_Ignavibacteria_35_20 species=unknown genus=unknown taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Excinuclease ABC subunit C domain-containing protein
DolZOral124_scaffold_1084_3
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1049..1942)
-----------------
DNA (894bp)
protein (298aa)
Copper amine oxidase-like domain-containing protein n=7 Tax=Clostridium thermocellum RepID=A3DC03_CLOTH
copper amine oxidase-like domain-containing protein
Copper amine oxidase-like domain-containing protein {ECO:0000313|EMBL:ABN51482.1}; Flags: Precursor;; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclos
DolZOral124_scaffold_1084_4
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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2107..3306
-----------------
DNA (1200bp)
protein (400aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZKJ8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ14261.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniforman
DolZOral124_scaffold_1084_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3303..3995
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZCJ3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ95578.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
DolZOral124_scaffold_1084_6
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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4007..5014
-----------------
DNA (1008bp)
protein (336aa)
ABC transporter, ATP-binding protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3W9N9_FUSMR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEO34576.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum A
ABC transporter-like protein
DolZOral124_scaffold_1084_7
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5120..5593
-----------------
DNA (474bp)
protein (158aa)
Ribosome maturation factor RimP n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RIMP_ALKOO
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
hypothetical protein
DolZOral124_scaffold_1084_8
Lactobacillus murinus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5606..6796
-----------------
DNA (1191bp)
protein (397aa)
transcription elongation factor NusA n=1 Tax=Lactobacillus animalis RepID=UPI0002195201
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1235801 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sour
NusA antitermination factor
DolZOral124_scaffold_1084_9
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6789..7049
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B582F2
Nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:KHS56635.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terri
Predicted nucleic-acid-binding protein implicated in transcription termination
DolZOral124_scaffold_1084_10
Jeotgalibacillus campisalis, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7042..7347
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein n=1 Tax=Streptococcus merionis RepID=UPI0003649959
Uncharacterized protein {ECO:0000313|EMBL:KIL47757.1}; TaxID=220754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Jeotgalibacillus.;" source="Jeotgalibacillus campisalis.;"
hypothetical protein
DolZOral124_scaffold_1084_11
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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7363..9675
-----------------
DNA (2313bp)
protein (771aa)
Translation initiation factor IF-2 n=1 Tax=Eubacterium sp. AS15 RepID=J4TLC8_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" sou
translation initiation factor IF-2
DolZOral124_scaffold_1084_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9682..10053
-----------------
DNA (372bp)
protein (124aa)
Ribosome-binding factor A n=1 Tax=Clostridium ultunense Esp RepID=M1Z4U7_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rbfA; ribosome-binding factor A
DolZOral124_scaffold_1084_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10037..11035
-----------------
DNA (999bp)
protein (333aa)
DHH family/DHHA1 domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZGW7_9CLOT
DHH family/DHHA1 domain protein {ECO:0000313|EMBL:CCQ93057.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.
phosphoesterase RecJ domain-containing protein
DolZOral124_scaffold_1084_14
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11010..11906
-----------------
DNA (897bp)
protein (299aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GV03_9FIRM
truB; tRNA pseudouridine 55 synthase
DolZOral124_scaffold_1084_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11925..12878
-----------------
DNA (954bp)
protein (318aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=457396 species="Bacteria; Firmicutes;
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26)
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H321_9CLOT
DolZOral124_scaffold_1084_16
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12859..13410
-----------------
DNA (552bp)
protein (184aa)
ylbH; putative rRNA methyltransferase YlbH (EC:2.1.1.-)
Putative rRNA methyltransferase YlbH {ECO:0000313|EMBL:AHM56753.1}; EC=2.1.1.- {ECO:0000313|EMBL:AHM56753.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; E
RNA methyltransferase RsmD family n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DWJ3_9FIRM
DolZOral124_scaffold_1084_17
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13407..13898
-----------------
DNA (492bp)
protein (164aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHJ7_9FIRM
DolZOral124_scaffold_1084_18
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13888..14646
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6Z9T2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37656.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
ATPase
DolZOral124_scaffold_1084_19
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14639..15832
-----------------
DNA (1194bp)
protein (398aa)
UPF0348 protein Cbei_1163 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LSL5_CLOB8
hypothetical protein
UPF0348 protein Cbei_1163 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (str
DolZOral124_scaffold_1084_20
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15847..17040
-----------------
DNA (1194bp)
protein (398aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia;
Acetate kinase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RPB7_9CLOT rbh
acetate kinase
DolZOral124_scaffold_1084_21
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17242..19890
-----------------
DNA (2649bp)
protein (883aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARS6_9CLOT
DolZOral124_scaffold_1084_22
Fusobacterium sp. CAG:649, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

19877..20497
-----------------
DNA (621bp)
protein (207aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1262900 species="Bacteria; F
Dephospho-CoA kinase n=1 Tax=Fusobacterium sp. CAG:649 RepID=R5X0A6_9FUSO
dephospho-CoA kinase
DolZOral124_scaffold_1084_23
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20481..21620
-----------------
DNA (1140bp)
protein (380aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EDS71701.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EDS71701.1};; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridi
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBQ4_9FIRM
oxygen-independent coproporphyrinogen III oxidase
DolZOral124_scaffold_1084_24
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

21632..23125
-----------------
DNA (1494bp)
protein (498aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MQD4_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDB98139.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
DacC2; D-alanyl-D-alanine carboxypeptidase
DolZOral124_scaffold_1084_25
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23135..24073
-----------------
DNA (939bp)
protein (313aa)
(50S ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M310_CLOCD
DolZOral124_scaffold_1084_26
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24066..24794
-----------------
DNA (729bp)
protein (243aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; L
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
RNA methyltransferase, RsmE family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XQB8_9FIRM
DolZOral124_scaffold_1084_27
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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24837..25985
-----------------
DNA (1149bp)
protein (383aa)
Patatin n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZXZ3_THEET
Patatin {ECO:0000313|EMBL:KHO62924.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS
patatin
DolZOral124_scaffold_1084_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26004..26579
-----------------
DNA (576bp)
protein (192aa)
GDSL-like Lipase/Acylhydrolase family protein n=2 Tax=Clostridium difficile RepID=T4AYP9_CLODI
putative esterase, SGNH hydrolase-type
GDSL-like Lipase/Acylhydrolase family protein {ECO:0000313|EMBL:EQE65861.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="
DolZOral124_scaffold_1084_29
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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26699..29221
-----------------
DNA (2523bp)
protein (841aa)
Uncharacterized protein n=1 Tax=Vibrio sp. AND4 RepID=A8T442_9VIBR
Membrane associated lipoprotein {ECO:0000313|EMBL:KGR36804.1}; TaxID=680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii.;"
hypothetical protein
DolZOral124_scaffold_1084_30
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29696..30946)
-----------------
DNA (1251bp)
protein (417aa)
SpoOJ/ParA/ParB/repB family protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AYM1_9CLOT
SpoOJ/ParA/ParB/repB family protein {ECO:0000313|EMBL:EOD01802.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacte
hypothetical protein
Displaying items 1-30 of 40 in total

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