ggKbase home page

DolZOral124_scaffold_1113

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1113_1
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..991
-----------------
DNA (990bp)
protein (330aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1M4P6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGO94321.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sub
hypothetical protein
DolZOral124_scaffold_1113_2
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

1157..1660
-----------------
DNA (504bp)
protein (168aa)
Flavodoxin n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCY7_9BACT
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
flavodoxin, long chain
DolZOral124_scaffold_1113_3
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1771..2217
-----------------
DNA (447bp)
protein (149aa)
UPI0003D1B849 related cluster n=1 Tax=unknown RepID=UPI0003D1B849
Uncharacterized protein {ECO:0000313|EMBL:GAF01913.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans
hypothetical protein
DolZOral124_scaffold_1113_4
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2252..3547)
-----------------
DNA (1296bp)
protein (432aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J3N7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99691.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
phenylacetate--CoA ligase
DolZOral124_scaffold_1113_5
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(3667..5730)
-----------------
DNA (2064bp)
protein (688aa)
OmpA/MotB domain protein id=2008316 bin=GWE2_Bacteroidetes_29_8 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
OmpA/MotB domain-containing protein Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
DolZOral124_scaffold_1113_6
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5778..6854)
-----------------
DNA (1077bp)
protein (359aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
Putative uncharacterized protein id=3651885 bin=GWF2_Bacteroidetes_33_38 species=Prochlorococcus marinus genus=Prochlorococcus taxon_order=Prochlorales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
DolZOral124_scaffold_1113_7
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6973..7818)
-----------------
DNA (846bp)
protein (282aa)
chemotaxis protein CheR; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=GWA2_Bacteroidetes_32_17_curated
CheR-type MCP methyltransferase id=2324634 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
chemotaxis protein CheR
DolZOral124_scaffold_1113_8
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7917..10511
-----------------
DNA (2595bp)
protein (865aa)
ATPase AAA Tax=GWA2_Bacteroidetes_31_9_curated
AAA+ family ATPase id=3316608 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
ATPase AAA
DolZOral124_scaffold_1113_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10528..11493
-----------------
DNA (966bp)
protein (322aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9GWE1_BACFG
GSCFA family protein {ECO:0000313|EMBL:EXZ74781.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.
hypothetical protein
DolZOral124_scaffold_1113_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11604..14960
-----------------
DNA (3357bp)
protein (1119aa)
Listeria/Bacterioides repeat n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVC9_9FIRM
Ig-like domain-containing surface protein
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CBL11319.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
DolZOral124_scaffold_1113_11
unknown

Not on your lists

15125..15493
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

DolZOral124_scaffold_1113_12
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

15616..15981
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FC81_SORC5
hypothetical protein Tax=RBG_13_Aminicenantes_63_10_curated
hypothetical protein
DolZOral124_scaffold_1113_13
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16295..17983
-----------------
DNA (1689bp)
protein (563aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1250005 speci
transcription termination factor Rho n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A6008
rho; transcription termination factor Rho
DolZOral124_scaffold_1113_14
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18026..19504
-----------------
DNA (1479bp)
protein (493aa)
Selenocysteine lyase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGN5_IGNAJ
Selenocysteine lyase
Selenocysteine lyase {ECO:0000313|EMBL:AFH48142.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium a
DolZOral124_scaffold_1113_15
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19593..20696
-----------------
DNA (1104bp)
protein (368aa)
hypothetical protein AtheD1_10191 id=4096874 bin=GWF2_Bacteroidetes_35_48 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
hypothetical protein
DolZOral124_scaffold_1113_16
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20729..21745
-----------------
DNA (1017bp)
protein (339aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003755C8B
von Willebrand factor A; K07114 uncharacterized protein Tax=GWB2_Bacteroidetes_41_8_curated
membrane protein
DolZOral124_scaffold_1113_17
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21828..23981)
-----------------
DNA (2154bp)
protein (718aa)
elongation factor G n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237CF92
small GTP-binding protein; K02355 elongation factor G Tax=GWA2_Bacteroidetes_40_15_curated
small GTP-binding protein
DolZOral124_scaffold_1113_18
unknown

Not on your lists

comp(24087..25139)
-----------------
DNA (1053bp)
protein (351aa)

This feature has no annotations

DolZOral124_scaffold_1113_19
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25194..27416)
-----------------
DNA (2223bp)
protein (741aa)
putative ATP-dependent DNA helicase id=4263683 bin=GWA2_Bacteroidetes_33_15 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
ATP-dependent DNA helicase RecQ Tax=GWD2_Bacteroidetes_33_33_curated
ATP-dependent DNA helicase RecQ
DolZOral124_scaffold_1113_20
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(27653..30103)
-----------------
DNA (2451bp)
protein (817aa)
inorganic pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=GWF2_RIF_IGX_33_9_curated
K(+)-insensitive pyrophosphate-energized proton pump id=3890962 bin=GWF2_Bacteroidetes_29_10 species=Prevotella bryantii genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
inorganic pyrophosphatase
DolZOral124_scaffold_1113_21
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30307..30750
-----------------
DNA (444bp)
protein (148aa)
Ribosome maturation factor RimP n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DKT3_9PORP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter lan
Ribosome maturation factor rimP
DolZOral124_scaffold_1113_22
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30769..32016
-----------------
DNA (1248bp)
protein (416aa)
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacteri
transcription elongation factor NusA
transcription elongation factor NusA id=4241745 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
DolZOral124_scaffold_1113_23
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

32089..34995
-----------------
DNA (2907bp)
protein (969aa)
translation initiation factor IF-2 id=1871974 bin=GWE2_Bacteroidetes_32_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
translation initiation factor IF-2
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_1113_24
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35076..35900)
-----------------
DNA (825bp)
protein (275aa)
rod shape-determining protein MreC n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A9827
Rod shape-determining protein MreC {ECO:0000313|EMBL:GAO29177.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum
rod shape-determining protein MreC
DolZOral124_scaffold_1113_25
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(35917..36936)
-----------------
DNA (1020bp)
protein (340aa)
MreB/Mrl family cell shape determining protein id=4630406 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
cell shape determining protein, MreB/Mrl family
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_1113_26
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(36988..37965)
-----------------
DNA (978bp)
protein (326aa)
peptidase M23
peptidase M23 id=3654159 bin=GWF2_Bacteroidetes_33_38 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_1113_27
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38214..39521
-----------------
DNA (1308bp)
protein (436aa)
GTPase Der n=2 Tax=Odoribacter RepID=F9Z351_ODOSD
GTP-binding protein engA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bac
DolZOral124_scaffold_1113_28
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39534..40100
-----------------
DNA (567bp)
protein (189aa)
id=4155014 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
id=4155014 Tax=GWF2_Bacteroidetes_49_14_curated
DolZOral124_scaffold_1113_29
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40409..43564
-----------------
DNA (3156bp)
protein (1052aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036803F2
Uncharacterized protein {ECO:0000313|EMBL:KGL63158.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
Displaying 29 items

View Taxonomy