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DolZOral124_scaffold_1240

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1240_1
unknown

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comp(1..69)
-----------------
DNA (69bp)
protein (23aa)

This feature has no annotations

DolZOral124_scaffold_1240_2
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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264..1748
-----------------
DNA (1485bp)
protein (495aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl
3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Fangia hongkongensis RepID=UPI0003709E28
3-octaprenyl-4-hydroxybenzoate carboxylyase
DolZOral124_scaffold_1240_3
Marinomonas ushuaiensis, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2024..2398)
-----------------
DNA (375bp)
protein (125aa)
Putative structural protein n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6VT88_MARMS
Structural protein {ECO:0000313|EMBL:ETX12513.1}; TaxID=1122207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas ushuaiensis DSM 15871.;"
hypothetical protein
DolZOral124_scaffold_1240_4
Alcanivorax borkumensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2527..3894
-----------------
DNA (1368bp)
protein (456aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase / glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.57)
Bifunctional protein GlmU {ECO:0000255|HAMAP-Rule:MF_01631}; Includes:; UDP-N-acetylglucosamine pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01631}; EC=2.7.7.23 {ECO:0000255|HAMAP-Rule:MF_01631};; N-a
Bifunctional protein GlmU n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=GLMU_ALCBS
DolZOral124_scaffold_1240_5
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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4016..4795
-----------------
DNA (780bp)
protein (260aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4HAN7_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI19111.1}; TaxID=1160283 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9807.;"
hypothetical protein
DolZOral124_scaffold_1240_6
Rahnella aquatilis, Rahnella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5051..7201)
-----------------
DNA (2151bp)
protein (717aa)
Bifunctional protein Aas n=1 Tax=Rahnella aquatilis HX2 RepID=H8NML2_RAHAQ
bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase
Bifunctional protein Aas {ECO:0000256|HAMAP-Rule:MF_01162, ECO:0000256|SAAS:SAAS00010159}; TaxID=1151116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
DolZOral124_scaffold_1240_7
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7442..8743)
-----------------
DNA (1302bp)
protein (434aa)
putative msrA, pms peptide methionine sulfoxide reductase (EC:1.8.4.11)
Possible msrA, pms peptide methionine sulfoxide reductase {ECO:0000313|EMBL:ACE83579.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ACE83579.1};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria
Possible msrA, pms peptide methionine sulfoxide reductase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHM8_CELJU
DolZOral124_scaffold_1240_8
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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8944..10407
-----------------
DNA (1464bp)
protein (488aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI000370B6FE
hypothetical protein
UPF0061 protein NAL212_2273 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosom
DolZOral124_scaffold_1240_9
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10601..10987)
-----------------
DNA (387bp)
protein (129aa)
30S ribosomal protein S9 n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N7I3_9GAMM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; C
rpsI; 30S ribosomal protein S9
DolZOral124_scaffold_1240_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11000..11428)
-----------------
DNA (429bp)
protein (143aa)
50S ribosomal protein L13 n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000379CD69
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thio
DolZOral124_scaffold_1240_11
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11576..11923
-----------------
DNA (348bp)
protein (116aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLD1_THISH
iron-sulfur cluster insertion protein ErpA
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibri
DolZOral124_scaffold_1240_12
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12439..13533)
-----------------
DNA (1095bp)
protein (365aa)
Chorismate mutase n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZJR6_9GAMM
Chorismate mutase {ECO:0000313|EMBL:EHM49596.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium
chorismate mutase
DolZOral124_scaffold_1240_13
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13558..16212)
-----------------
DNA (2655bp)
protein (885aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardioba
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZJQ1_9GAMM
DolZOral124_scaffold_1240_14
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16487..17053
-----------------
DNA (567bp)
protein (189aa)
OmpA family protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8Z9_9GAMM
OmpA family protein {ECO:0000313|EMBL:EEV88904.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacteriu
OmpA family protein
DolZOral124_scaffold_1240_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17210..18196)
-----------------
DNA (987bp)
protein (329aa)
AraC family transcriptional regulator (EC:1.6.99.3)
Probable transcriptional regulator n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRB7_9PROT
Probable transcriptional regulator {ECO:0000313|EMBL:EDP64838.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
DolZOral124_scaffold_1240_16
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18214..18669)
-----------------
DNA (456bp)
protein (152aa)
Alkyl hydroperoxide reductase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7UHB2_PSEME
Strain MEJ086 contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ02639.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
alkyl hydroperoxide reductase
DolZOral124_scaffold_1240_17
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

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18747..19691
-----------------
DNA (945bp)
protein (315aa)
Putative potassium channel protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIJ1_9GAMM
Putative potassium channel protein {ECO:0000313|EMBL:EAR08070.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
potassium channel protein
DolZOral124_scaffold_1240_18
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

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19903..20775
-----------------
DNA (873bp)
protein (291aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BHX5_9GAMM
dihydrodipicolinate synthase
DolZOral124_scaffold_1240_19
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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20838..21956
-----------------
DNA (1119bp)
protein (373aa)
NlpB/DapX lipoprotein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NA87_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDH43694.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
lipoprotein
DolZOral124_scaffold_1240_20
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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22122..24101
-----------------
DNA (1980bp)
protein (660aa)
DNA mismatch repair protein MutL n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIN8_NEPCE
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacte
DNA mismatch repair protein MutL
DolZOral124_scaffold_1240_21
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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24105..25091
-----------------
DNA (987bp)
protein (329aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=1 Tax=Thauera sp. 28 RepID=N6ZRC9_9RHOO
delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase
DolZOral124_scaffold_1240_22
Marinomonas posidonica, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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25309..26841
-----------------
DNA (1533bp)
protein (511aa)
Amino acid carrier protein n=1 Tax=Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181) RepID=F6CSZ3_MARPP rbh
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:AEF55051.1}; TaxID=491952 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas posidonica (strain
DolZOral124_scaffold_1240_23
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27023..27601)
-----------------
DNA (579bp)
protein (193aa)
Rhomboid family protein n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7R6P2_KANKD
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ACV25558.1}; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensi
DolZOral124_scaffold_1240_24
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27721..29085)
-----------------
DNA (1365bp)
protein (455aa)
Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EW26_DICNV
pilQ; type IV fimbrial pore PilQ
Type IV fimbrial pore PilQ {ECO:0000313|EMBL:ABQ13170.1}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="Dicheloba
DolZOral124_scaffold_1240_25
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(29093..29707)
-----------------
DNA (615bp)
protein (205aa)
Tfp pilus assembly protein PilP n=2 Tax=Legionella longbeachae RepID=D3HQQ2_LEGLN
pilP; Tfp pilus assembly protein PilP
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
DolZOral124_scaffold_1240_26
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29697..30308)
-----------------
DNA (612bp)
protein (204aa)
Pilus assembly protein, PilO n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZGK7_9GAMM
Pilus assembly protein, PilO {ECO:0000313|EMBL:EHM53158.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardi
pilus assembly protein, PilO
DolZOral124_scaffold_1240_27
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30305..30898)
-----------------
DNA (594bp)
protein (198aa)
Fimbrial assembly protein PilN n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NAT7_9GAMM
Fimbrial assembly protein PilN {ECO:0000313|EMBL:EEV88308.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Car
fimbrial assembly
DolZOral124_scaffold_1240_28
CG_Mariprof_01, Zetaproteobacteria, Proteobacteria, Bacteria

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comp(30900..31973)
-----------------
DNA (1074bp)
protein (358aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI00037784BD
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=CG_Mariprof_01
DolZOral124_scaffold_1240_29
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31998..33272)
-----------------
DNA (1275bp)
protein (425aa)
Type II citrate synthase {ECO:0000313|EMBL:AKH21179.1}; EC=2.3.3.1 {ECO:0000313|EMBL:AKH21179.1};; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedime
gltA; type II citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WG66_9GAMM
DolZOral124_scaffold_1240_30
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33391..33633)
-----------------
DNA (243bp)
protein (81aa)
50S ribosomal protein L31 type B n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N798_9GAMM
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteri
rpmE; 50S ribosomal protein L31
Displaying items 1-30 of 75 in total

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