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DolZOral124_scaffold_1248

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1248_1
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..294)
-----------------
DNA (294bp)
protein (98aa)
CRISPR-associated protein Cas4 n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CF5D
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
CRISPR-associated protein Cas4
DolZOral124_scaffold_1248_2
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(369..2606)
-----------------
DNA (2238bp)
protein (746aa)
CRISPR-associated helicase Cas3 n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D753 rbh
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:GAO28626.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JC
CRISPR-associated helicase Cas3
DolZOral124_scaffold_1248_3
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2651..3334)
-----------------
DNA (684bp)
protein (228aa)
CRISPR-associated protein Cas5 n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D754
CRISPR-associated protein cas5, subtype I-b/tneap {ECO:0000313|EMBL:KKB59645.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sour
Cas5 family CRISPR-associated protein
DolZOral124_scaffold_1248_4
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3337..4416)
-----------------
DNA (1080bp)
protein (360aa)
CRISPR-associated protein DevR n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D755
CRISPR-associated negative autoregulator {ECO:0000313|EMBL:GAO28624.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubi
DevR family CRISPR-associated autoregulator
DolZOral124_scaffold_1248_5
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4432..5832)
-----------------
DNA (1401bp)
protein (467aa)
CRISPR-associated protein Cst1 n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D756 rbh
hypothetical protein Tax=GWF2_Bacteroidetes_40_14_curated
hypothetical protein rbh
DolZOral124_scaffold_1248_6
unknown

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comp(6057..6155)
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

DolZOral124_scaffold_1248_7
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6388..7176)
-----------------
DNA (789bp)
protein (263aa)
CRISPR-associated protein Cas6 n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D758
CRISPR-associated endoribonuclease {ECO:0000256|PIRNR:PIRNR005054}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrin
cas6; CRISPR-associated endoribonuclease Cas6
DolZOral124_scaffold_1248_8
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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7552..8625
-----------------
DNA (1074bp)
protein (358aa)
transmembrane family-2 glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase 2 family protein id=4408895 bin=GWF2_Bacteroidetes_35_48 species=Bizionia argentinensis genus=Bizionia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
family 2 glycosyl transferase Tax=GWF2_Bacteroidetes_35_48_curated
DolZOral124_scaffold_1248_9
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8616..9230
-----------------
DNA (615bp)
protein (205aa)
RNA polymerase subunit sigma-24 n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D3D2
RNA polymerase sigma factor SigW {ECO:0000313|EMBL:GAO28231.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum J
RNA polymerase subunit sigma-24
DolZOral124_scaffold_1248_10

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comp(9234..10271)
-----------------
DNA (1038bp)
protein (346aa)
Marine sediment metagenome DNA, contig: S12H4_C00834 {ECO:0000313|EMBL:GAI70115.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
D-alanine--D-alanine ligase id=3804337 bin=GWF2_Bacteroidetes_33_38 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
D-alanine--D-alanine ligase
DolZOral124_scaffold_1248_11
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10517..11710)
-----------------
DNA (1194bp)
protein (398aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZI9_OWEHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV33642.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenwe
DolZOral124_scaffold_1248_12
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11714..13132)
-----------------
DNA (1419bp)
protein (473aa)
Putative membrane protein involved in D-alanine export n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZJ0_OWEHD rbh
putative membrane protein involved in D-alanine export rbh
Putative membrane protein involved in D-alanine export {ECO:0000313|EMBL:AEV33643.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" so
DolZOral124_scaffold_1248_13
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13178..14017)
-----------------
DNA (840bp)
protein (280aa)
colicin V production protein; K03558 membrane protein required for colicin V production Tax=GWA2_Bacteroidetes_31_9b_curated
Putative uncharacterized protein id=4182770 bin=GWF2_Bacteroidetes_33_16 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Colicin V production protein
DolZOral124_scaffold_1248_14
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14105..15622
-----------------
DNA (1518bp)
protein (506aa)
GH3 auxin-responsive promoter id=3653878 bin=GWF2_Bacteroidetes_33_38 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
GH3 auxin-responsive promoter Tax=GWF2_Bacteroidetes_33_38_curated
GH3 auxin-responsive promoter-binding protein
DolZOral124_scaffold_1248_15
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15619..16419
-----------------
DNA (801bp)
protein (267aa)
Putative uncharacterized protein id=3653879 bin=GWF2_Bacteroidetes_33_38 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
DolZOral124_scaffold_1248_16
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

16482..17096
-----------------
DNA (615bp)
protein (205aa)
Deoxynucleoside kinase id=1889477 bin=GWD2_Bacteroidetes_40_43 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
deoxynucleoside kinase
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_1248_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(17105..17764)
-----------------
DNA (660bp)
protein (220aa)
Putative membrane protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WB09_9CYAN
DoxX family protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
DolZOral124_scaffold_1248_18
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17921..19012)
-----------------
DNA (1092bp)
protein (364aa)
Tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=GWE2_Bacteroidetes_32_14_curated
Tetraacyldisaccharide 4'-kinase id=4132050 bin=GWF2_Bacteroidetes_33_16 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
tetraacyldisaccharide 4'-kinase
DolZOral124_scaffold_1248_19
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19093..20856)
-----------------
DNA (1764bp)
protein (588aa)
signal peptide peptidase SppA, 67K type; K04773 protease IV [EC:3.4.21.-] Tax=GWA2_Bacteroidetes_31_9_curated
Signal peptide peptidase SppA, 67K type id=4263424 bin=GWA2_Bacteroidetes_33_15 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
signal peptide peptidase SppA, 67K type
DolZOral124_scaffold_1248_trna_1
unknown

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21210..21281
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_1248_20
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


21306..21557
-----------------
DNA (252bp)
protein (84aa)
30S ribosomal protein S20 n=1 Tax=Butyricimonas synergistica RepID=UPI00037DBBFC
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500, ECO:0000313|EMBL:KIO42805.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroi
rpsT; 30S ribosomal protein S20
DolZOral124_scaffold_1248_21
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21612..22304
-----------------
DNA (693bp)
protein (231aa)
DNA repair protein id=4263438 bin=GWA2_Bacteroidetes_33_15 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
DolZOral124_scaffold_1248_22
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22316..23233
-----------------
DNA (918bp)
protein (306aa)
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
Putative uncharacterized protein id=4224127 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
hypothetical protein
DolZOral124_scaffold_1248_23
Stegodyphus mimosarum, Stegodyphus, Araneae, Arachnida, Arthropoda, Metazoa

Not on your lists

23368..23802
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KFM79942.1}; Flags: Fragment;; TaxID=407821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; E
DolZOral124_scaffold_1248_24
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24048..24749
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
Uracil phosphoribosyltransferase id=4224125 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
hypothetical protein
DolZOral124_scaffold_1248_25
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24938..26251)
-----------------
DNA (1314bp)
protein (438aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KMZ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC01848.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
hypothetical protein
DolZOral124_scaffold_1248_26
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

26386..27147
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein id=1830377 bin=GWE2_Bacteroidetes_42_42 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWF2_Bacteroidetes_43_63_curated
hypothetical protein
DolZOral124_scaffold_1248_27
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27458..28465
-----------------
DNA (1008bp)
protein (336aa)
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=GWD2_Bacteroidetes_33_33_curated
Glyceraldehyde-3-phosphate dehydrogenase, type I id=1745470 bin=GWB2_Bacteroidetes_32_14 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
glyceraldehyde-3-phosphate dehydrogenase, type I
DolZOral124_scaffold_1248_28
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28577..29389)
-----------------
DNA (813bp)
protein (271aa)
gaf domain protein Tax=GWA2_Bacteroidetes_31_9b_curated
GAF domain protein id=2095487 bin=GWB2_Bacteroidetes_32_14 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
gaf domain protein
DolZOral124_scaffold_1248_29
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(29409..29975)
-----------------
DNA (567bp)
protein (189aa)
cheb methylesterase (EC:3.1.1.61)
CheB methylesterase id=2095491 bin=GWB2_Bacteroidetes_32_14 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
Tax=BJP_IG2102_Bacteroidetes_40_9
Displaying items 1-30 of 45 in total

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