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DolZOral124_scaffold_1282

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1282_1
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..547
-----------------
DNA (546bp)
protein (182aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1515615 species="Bacteria; B
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NAV1_9PORP
DolZOral124_scaffold_1282_2
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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970..2379
-----------------
DNA (1410bp)
protein (470aa)
Precorrin-3B C(17)-methyltransferase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IR69_9PORP rbh
Precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:ERJ70292.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromon
precorrin-3 methylase/precorrin-8X methylmutase
DolZOral124_scaffold_1282_3
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2372..3598
-----------------
DNA (1227bp)
protein (409aa)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2JWH3_9PORP
Cytochrome D ubiquinol oxidase subunit II {ECO:0000313|EMBL:KGN85557.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphy
cobL; precorrin-6Y C5,15-methyltransferase
DolZOral124_scaffold_1282_4
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3696..4670
-----------------
DNA (975bp)
protein (325aa)
Beta-lactamase-like protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHH4_9DELT
Beta-lactamase-like protein {ECO:0000313|EMBL:EDM74691.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Pl
Zn-dependent hydrolase
DolZOral124_scaffold_1282_5
unknown

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4675..4845
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

DolZOral124_scaffold_1282_trna_4
unknown

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comp(4819..4892)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1282_6
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5000..5323
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN69947.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-23
DolZOral124_scaffold_1282_7
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5328..5900
-----------------
DNA (573bp)
protein (191aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IUE3_9PORP rbh
ruvC; Holliday junction resolvase
DolZOral124_scaffold_1282_8
Porphyromonas sp. oral taxon 279, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5956..7119
-----------------
DNA (1164bp)
protein (388aa)
Bacterial capsule synthesis protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5VVK8_9PORP
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EJU17002.1}; TaxID=1125723 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromona
capsule biosynthesis protein CapA
DolZOral124_scaffold_1282_9
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7116..9962)
-----------------
DNA (2847bp)
protein (949aa)
DNA-directed DNA polymerase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NII4_9PORP rbh
DNA polymerase I {ECO:0000313|EMBL:KGN86233.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860
DNA polymerase I
DolZOral124_scaffold_1282_10
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10222..11901
-----------------
DNA (1680bp)
protein (560aa)
AMP-binding enzyme n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IYA5_9PORP
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KGN84750.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas
long-chain-fatty-acid-CoA ligase
DolZOral124_scaffold_1282_11
unknown

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comp(11978..12406)
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

DolZOral124_scaffold_1282_12
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13280..17008
-----------------
DNA (3729bp)
protein (1243aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEX43771.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEX43771.1};; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9L1P8_9BACE
peptidase S9B dipeptidylpeptidase IV domain-containing protein
DolZOral124_scaffold_1282_13
Prevotella timonensis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17020..20334
-----------------
DNA (3315bp)
protein (1105aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1W128_9BACT rbh
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFA96936.1}; TaxID=679189 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Pre
TonB-dependent receptor plug
DolZOral124_scaffold_1282_14
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20380..21762
-----------------
DNA (1383bp)
protein (461aa)
SusD family protein n=2 Tax=Bacteroides RepID=C9L1P6_9BACE
Putative outer membrane protein {ECO:0000313|EMBL:CDC51029.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source=
SusD family.
DolZOral124_scaffold_1282_15
unknown

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21776..22003
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

DolZOral124_scaffold_1282_16
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22008..23255
-----------------
DNA (1248bp)
protein (416aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6S6X5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC51031.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
DolZOral124_scaffold_1282_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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23508..24743
-----------------
DNA (1236bp)
protein (412aa)
Putative uncharacterized protein id=1847415 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
DolZOral124_scaffold_1282_18
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24766..25650
-----------------
DNA (885bp)
protein (295aa)
Phosphorylase family protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GWI9_9PORP
Phosphorylase {ECO:0000313|EMBL:KGN82241.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
phosphorylase family protein
DolZOral124_scaffold_1282_19
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25666..26793
-----------------
DNA (1128bp)
protein (376aa)
LAO/AO transport system ATPase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NFV7_9PORP
Transporter {ECO:0000313|EMBL:KGN82240.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
arginine/ornithine transport system ATPase
DolZOral124_scaffold_1282_20
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26838..27590
-----------------
DNA (753bp)
protein (251aa)
Dolichol-phosphate mannosyltransferase n=2 Tax=Porphyromonas RepID=S4N8W3_9PORP
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:KGN83609.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Po
glycosyl transferase family 2
DolZOral124_scaffold_1282_21
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27644..29350
-----------------
DNA (1707bp)
protein (569aa)
Peptidase, S41 family n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NAB2_9PORP
Peptidase S41 {ECO:0000313|EMBL:KGN83607.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
carboxyl-terminal protease
DolZOral124_scaffold_1282_22
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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29352..29867
-----------------
DNA (516bp)
protein (172aa)
FHA domain protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J4VNK5_9PORP
Phosphopeptide-binding protein {ECO:0000313|EMBL:KGN83606.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp.
hypothetical protein
DolZOral124_scaffold_1282_23
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29872..30813)
-----------------
DNA (942bp)
protein (314aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1515615 specie
Epoxyqueuosine reductase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IP09_9PORP
iron-sulfur cluster binding protein
DolZOral124_scaffold_1282_24
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30817..31824)
-----------------
DNA (1008bp)
protein (336aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6H1M4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN85113.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_1282_25
Tenacibaculum mesophilum, Tenacibaculum, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(32018..34282)
-----------------
DNA (2265bp)
protein (755aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
catalase/hydroperoxidase HPI(I) n=1 Tax=Aquimarina agarilytica RepID=UPI0002898E7F rbh
catalase/peroxidase HPI
DolZOral124_scaffold_1282_26
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(34478..35983)
-----------------
DNA (1506bp)
protein (502aa)
Succinate CoA transferase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J4VRK0_9PORP
Acetyl-CoA hydrolase {ECO:0000313|EMBL:KGN82345.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 O
acetyl-CoA hydrolase/transferase family protein
DolZOral124_scaffold_1282_trna_3
unknown

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comp(36297..36369)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_1282_27
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36436..37854)
-----------------
DNA (1419bp)
protein (473aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI00037F5365
Uncharacterized protein {ECO:0000313|EMBL:EKN12175.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
Na+/H+ antiporter
DolZOral124_scaffold_1282_28
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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38026..38595
-----------------
DNA (570bp)
protein (190aa)
Elongation factor P n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NBB4_9PORP
Elongation factor P {ECO:0000313|EMBL:KGN75195.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
efp-2; elongation factor P
Displaying items 1-30 of 45 in total

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