ggKbase home page

DolZOral124_scaffold_1328

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1328_1
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1304
-----------------
DNA (1302bp)
protein (434aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Kiloniella laminariae RepID=UPI0003802925
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJS00023.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="De
dppA; dipeptide transport protein
DolZOral124_scaffold_1328_2

Not on your lists

1385..2395
-----------------
DNA (1011bp)
protein (337aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XYQ4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD35695.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dppB; Dipeptide transport system permease protein DppB
DolZOral124_scaffold_1328_3

Not on your lists

2400..3314
-----------------
DNA (915bp)
protein (305aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YK14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD37497.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dppc1; binding-protein-dependent transport system inner membrane protein
DolZOral124_scaffold_1328_4
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3358..4359
-----------------
DNA (1002bp)
protein (334aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JJT1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ12590.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
putative dipeptide ABC transporter, ATP-binding protein
DolZOral124_scaffold_1328_5
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4360..5328
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JAA2_9DELT rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS00026.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfob
putative dipeptide ABC transporter, ATP-binding protein
DolZOral124_scaffold_1328_6
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6134..7339
-----------------
DNA (1206bp)
protein (402aa)
Periplasmic binding protein n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BVE1_DESAD rbh
periplasmic binding protein rbh
Periplasmic binding protein {ECO:0000313|EMBL:ACS80116.1}; Flags: Precursor;; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibri
DolZOral124_scaffold_1328_7
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7345..8433
-----------------
DNA (1089bp)
protein (363aa)
Transport system permease protein n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BVE0_DESAD rbh
ABC transporter permease rbh
Transport system permease protein {ECO:0000313|EMBL:ACS80115.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="
DolZOral124_scaffold_1328_8
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8436..9224
-----------------
DNA (789bp)
protein (263aa)
ABC transporter related n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BVD9_DESAD rbh
ABC transporter rbh
ABC transporter related {ECO:0000313|EMBL:ACS80114.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
DolZOral124_scaffold_1328_9
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9409..10302
-----------------
DNA (894bp)
protein (298aa)
Metal dependent hydrolase n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q892E1_CLOTE
metal dependent hydrolase
Metal dependent hydrolase {ECO:0000313|EMBL:AAO36654.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massac
DolZOral124_scaffold_1328_10
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10299..10877
-----------------
DNA (579bp)
protein (193aa)
Uracil-DNA glycosylase {ECO:0000313|EMBL:GAF04085.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans
phage SPO1 DNA polymerase-related protein id=2095667 bin=GWB2_Bacteroidetes_32_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
phage SPO1 DNA polymerase-like protein
DolZOral124_scaffold_1328_11
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

11107..13386
-----------------
DNA (2280bp)
protein (760aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Pr
Ribonucleoside-diphosphate reductase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QP53_9PROT rbh
ribonucleoside-diphosphate reductase subunit alpha
DolZOral124_scaffold_1328_12
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

13436..14473
-----------------
DNA (1038bp)
protein (346aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobact
Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Fusobacterium ulcerans RepID=H1PW96_9FUSO
hypothetical protein
DolZOral124_scaffold_1328_13
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14498..15445
-----------------
DNA (948bp)
protein (316aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BWG2_DESAD rbh
glycerophosphoryl diester phosphodiesterase rbh
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ACS78406.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;
DolZOral124_scaffold_1328_14
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15590..16354
-----------------
DNA (765bp)
protein (255aa)
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KJR97262.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbace
Glycerol-3-phosphate regulon repressor,transcriptional regulator protein, DeoR family id=2165675 bin=GWB2_Desulfobacterales_56_26 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
glpR; transcriptional regulator DeoR family
DolZOral124_scaffold_1328_15
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16426..18153
-----------------
DNA (1728bp)
protein (576aa)
ABC transporter substrate-binding protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J0T8_9DELT rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESQ07924.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; envir
extracellular solute-binding protein
DolZOral124_scaffold_1328_16
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18356..18751
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z4L4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJR98977.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
hypothetical protein
DolZOral124_scaffold_1328_17
Campylobacter gracilis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

18941..19453
-----------------
DNA (513bp)
protein (171aa)
NapC/NirT cytochrome c family, N-terminal domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PH56_9PROT
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=553220 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campyl
cytochrome C
DolZOral124_scaffold_1328_18
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19463..20782
-----------------
DNA (1320bp)
protein (440aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GXR4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA90170.1}; Flags: Precursor;; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="T
DolZOral124_scaffold_1328_19
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20864..21874)
-----------------
DNA (1011bp)
protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000255|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000255|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000255|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=GPDA_DESPS rbh
glycerol-3-phosphate dehydrogenase
DolZOral124_scaffold_1328_20
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21861..24365)
-----------------
DNA (2505bp)
protein (835aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfob
DNA gyrase subunit A n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQJ4_DESPS rbh
DNA gyrase, subunit A rbh
DolZOral124_scaffold_1328_21
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24381..26804)
-----------------
DNA (2424bp)
protein (808aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=177439 species="Bacteria; Pr
DNA gyrase subunit B n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQJ5_DESPS rbh
DNA gyrase, subunit B rbh
DolZOral124_scaffold_1328_22
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26875..28005)
-----------------
DNA (1131bp)
protein (377aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=177439 species="Bacter
DNA polymerase III subunit beta n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQJ6_DESPS rbh
DNA polymerase III, beta chain rbh
DolZOral124_scaffold_1328_23
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28359..29423
-----------------
DNA (1065bp)
protein (355aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQJ7_DESPS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAG35376.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea ps
DolZOral124_scaffold_1328_24
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29416..30012
-----------------
DNA (597bp)
protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacteral
Probable 5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQJ8_DESPS
5-formyltetrahydrofolate cyclo-ligase
DolZOral124_scaffold_1328_25
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30109..31227
-----------------
DNA (1119bp)
protein (373aa)
Related to two-component system response regulator (Ntr family) n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQJ9_DESPS rbh
putative domain HDIG-containing protein Tax=GWB2_Desulfobacterales_56_26_curated
Ntr family protein two-component system response regulator rbh
DolZOral124_scaffold_1328_26
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31231..31515
-----------------
DNA (285bp)
protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000255|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000255|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=GATC_DESPS
Glu-tRNA(Gln) amidotransferase, subunit C
DolZOral124_scaffold_1328_27
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31546..33003
-----------------
DNA (1458bp)
protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000255|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000255|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000255|HAMAP-Rule:MF_00120};; TaxID=177439
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=GATA_DESPS rbh
glutamyl-tRNA(Gln) amidotransferase, subunit A rbh
DolZOral124_scaffold_1328_28
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33051..34166
-----------------
DNA (1116bp)
protein (372aa)
Histidinol-phosphate aminotransferase {ECO:0000255|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000255|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000255|HAMAP-Rule:MF_01023}; TaxID
Histidinol-phosphate aminotransferase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=HIS8_DESPS rbh
histidinol-phosphate aminotransferase rbh
DolZOral124_scaffold_1328_29
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34156..34821
-----------------
DNA (666bp)
protein (222aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=uncultured bacterium RepID=K1ZRA6_9BACT
cytidylate kinase
DolZOral124_scaffold_1328_30
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34876..35607)
-----------------
DNA (732bp)
protein (244aa)
Hypothetical membrane protein (BatE) n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQK3_DESPS
hypothetical protein
Hypothetical membrane protein (BatE) {ECO:0000313|EMBL:CAG35370.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="De
Displaying items 1-30 of 32 in total

View Taxonomy