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DolZOral124_scaffold_1398

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1398_1
unknown

Not on your lists

comp(37..738)
-----------------
DNA (702bp)
protein (234aa)

This feature has no annotations

DolZOral124_scaffold_1398_2
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(728..1834)
-----------------
DNA (1107bp)
protein (369aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPN3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KDB02462.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas s
hypothetical protein
DolZOral124_scaffold_1398_3
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2445..3725
-----------------
DNA (1281bp)
protein (427aa)
Sulfur oxidation molybdopterin C protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E558_9RHOB rbh
Sulfur oxidation molybdopterin C protein {ECO:0000313|EMBL:EDM30352.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="R
soxC; sulfur oxidation molybdopterin C protein
DolZOral124_scaffold_1398_4
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3709..4803
-----------------
DNA (1095bp)
protein (365aa)
Diheme Cytochrome c SoxD n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B6H7_9RHOB rbh
MFS transporter {ECO:0000313|EMBL:KEJ89527.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter donghicol
soxD2; sulfite oxidase cytochrome subunit
DolZOral124_scaffold_1398_5
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4948..5661
-----------------
DNA (714bp)
protein (238aa)
Sulfur oxidation protein SoxY n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FWD1_9RHOB
Sulfur oxidation protein SoxY {ECO:0000313|EMBL:EDM69509.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter
soxE; diheme cytochrome c SoxE
DolZOral124_scaffold_1398_6
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5710..6975
-----------------
DNA (1266bp)
protein (422aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4UZV1_9RHOB rbh
Flavocytochrome C {ECO:0000313|EMBL:KIC17654.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
soxF; sulfur oxidation F protein
DolZOral124_scaffold_1398_7
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7267..7893
-----------------
DNA (627bp)
protein (209aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Roseovarius sp. TM1035 RepID=A6DVE8_9RHOB rbh
DolZOral124_scaffold_1398_8
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8035..9303
-----------------
DNA (1269bp)
protein (423aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TT09_9RHOB rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacteral
clpX; ATP-dependent protease ATP-binding subunit ClpX
DolZOral124_scaffold_1398_9
unknown

Not on your lists

comp(9461..9748)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

DolZOral124_scaffold_1398_10
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9915..10136)
-----------------
DNA (222bp)
protein (74aa)
50S ribosomal protein L31 n=1 Tax=Roseobacter sp. MED193 RepID=A3X618_9RHOB
LSU ribosomal protein L31P
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rose
DolZOral124_scaffold_1398_11
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10148..10540)
-----------------
DNA (393bp)
protein (131aa)
50S ribosomal protein L19 n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CDN8_9RHOB
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ocea
rplS; ribosomal protein L19
DolZOral124_scaffold_1398_12
unknown

Not on your lists

comp(10531..10701)
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

DolZOral124_scaffold_1398_13
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10790..11701)
-----------------
DNA (912bp)
protein (304aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7EVI7_PHAIB rbh
trmD; tRNA (guanine-N(1)-)-methyltransferase TrmD
DolZOral124_scaffold_1398_14
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11727..13046)
-----------------
DNA (1320bp)
protein (440aa)
puuB; gamma-glutamylputrescine oxidoreductase PuuB (EC:1.4.3.-)
Oxidoreductase, FAD-binding, putative n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FW03_9RHOB rbh
Oxidoreductase, FAD-binding, putative {ECO:0000313|EMBL:EDM69659.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Rose
DolZOral124_scaffold_1398_15
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13043..14416)
-----------------
DNA (1374bp)
protein (458aa)
Glutamine synthetase family protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SC74_9RHOB rbh
Glutamine synthetase family protein {ECO:0000313|EMBL:EAP80301.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulf
glutamine synthetase family protein
DolZOral124_scaffold_1398_16
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14413..15093)
-----------------
DNA (681bp)
protein (227aa)
Glutamine amidotransferase, class I n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SXF7_9RHOB rbh
Glutamine amidotransferase {ECO:0000313|EMBL:KFC25748.1}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacte
glutamine amidotransferase
DolZOral124_scaffold_1398_17
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15141..16457)
-----------------
DNA (1317bp)
protein (439aa)
glutamate--putrescine ligase (EC:6.3.1.2)
glutamine synthetase n=1 Tax=Ruegeria conchae RepID=UPI000237A910 rbh
Glutamine synthetase {ECO:0000313|EMBL:KIC42320.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;"
DolZOral124_scaffold_1398_18
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16621..17427)
-----------------
DNA (807bp)
protein (269aa)
His/Glu/Gln/Arg/opine family ABC transporter, permease protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E293_9RHOB rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KAJ02376.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfi
amino acid transport permease
DolZOral124_scaffold_1398_19
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17424..18308)
-----------------
DNA (885bp)
protein (295aa)
UPI0003D1A933 related cluster n=1 Tax=unknown RepID=UPI0003D1A933 rbh
Contig7, whole genome shotgun sequence {ECO:0000313|EMBL:ETA51294.2}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteracea
binding-protein-dependent transport system inner membrane protein
DolZOral124_scaffold_1398_20
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18372..19088)
-----------------
DNA (717bp)
protein (239aa)
His/Glu/Gln/Arg/opine family ABC transporter, periplasmic His/Glu/Gln/Arg/opine family-binding protein n=1 Tax=Sagittula stellata E-37 RepID=A3K0F0_9RHOB rbh
putative amino acid transport extracellular solute binding protein
Putative amino acid transport extracellular solute binding protein {ECO:0000313|EMBL:AII88286.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
DolZOral124_scaffold_1398_21
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19125..19793)
-----------------
DNA (669bp)
protein (223aa)
Amino acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9R423_9RHOB
Amino acid ABC transporter {ECO:0000313|EMBL:KAJ02378.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter
polar amino acid transport system, substrate-binding protein
DolZOral124_scaffold_1398_22
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19877..20677)
-----------------
DNA (801bp)
protein (267aa)
UPI0003D1BAF3 related cluster n=1 Tax=unknown RepID=UPI0003D1BAF3 rbh
Contig7, whole genome shotgun sequence {ECO:0000313|EMBL:ETA51292.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteracea
amino acid transport ATP-binding protein
DolZOral124_scaffold_1398_23
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20814..21296)
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTV3_RUEPO
Uncharacterized protein {ECO:0000313|EMBL:KGL02281.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter
hypothetical protein
DolZOral124_scaffold_1398_24
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21325..21768)
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FQP6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM71114.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. Az
hypothetical protein
DolZOral124_scaffold_1398_25
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21773..22066)
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=V5UZ10_RUEPO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB86017.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
DolZOral124_scaffold_1398_26
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22334..23074)
-----------------
DNA (741bp)
protein (247aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FQP8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGB80508.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI2
DolZOral124_scaffold_1398_27
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23218..23781
-----------------
DNA (564bp)
protein (188aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E0G9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGM88575.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucos
DolZOral124_scaffold_1398_28
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23934..25577)
-----------------
DNA (1644bp)
protein (548aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B8X5_9RHOB rbh
DolZOral124_scaffold_1398_29
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25754..26113)
-----------------
DNA (360bp)
protein (120aa)
Preprotein translocase, SecG subunit n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B297_9RHOB
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EDZ40578.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae b
secG; preprotein translocase subunit SecG
DolZOral124_scaffold_1398_30
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26189..27427)
-----------------
DNA (1239bp)
protein (413aa)
Major facilitator superfamily MFS_1 n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28VC6_JANSC rbh
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD53336.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannasc
Displaying items 1-30 of 42 in total

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