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DolZOral124_scaffold_1431

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1431_1
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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comp(311..685)
-----------------
DNA (375bp)
protein (125aa)
UPF0102 protein BN579_00190 n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C0K3_9FIRM
UPF0102 protein BN579_00190 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
conserved hypothetical protein TIGR00252
DolZOral124_scaffold_1431_2
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(672..941)
-----------------
DNA (270bp)
protein (90aa)
FlhB domain protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VKG0_9CLOT
FlhB domain protein {ECO:0000313|EMBL:CCZ90950.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp.
type III secretion exporter
DolZOral124_scaffold_1431_3
unknown

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comp(958..2586)
-----------------
DNA (1629bp)
protein (543aa)

This feature has no annotations

DolZOral124_scaffold_1431_4
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2596..3345)
-----------------
DNA (750bp)
protein (250aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
ribonuclease HII n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B34BCE
DolZOral124_scaffold_1431_5
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3326..4420)
-----------------
DNA (1095bp)
protein (365aa)
TPR repeat-containing protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNY3_ALKMQ
Uncharacterized protein {ECO:0000313|EMBL:KJF28232.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
DolZOral124_scaffold_1431_6
Mycoplasma sp. CAG:776, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(4422..5237)
-----------------
DNA (816bp)
protein (272aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NJC5_9MOLU
inorganic polyphosphate/ATP-NAD kinase
DolZOral124_scaffold_1431_7
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5317..5784)
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00942.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
DolZOral124_scaffold_1431_8
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5794..6045)
-----------------
DNA (252bp)
protein (84aa)
Uncharacterized protein n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E4I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF15416.1}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus s
hypothetical protein
DolZOral124_scaffold_1431_9
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6047..6451)
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KPJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45442.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
putative PilT-like ATPase
DolZOral124_scaffold_1431_10
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6595..7692)
-----------------
DNA (1098bp)
protein (366aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6W5_BLAHA
DolZOral124_scaffold_1431_11
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7640..8551)
-----------------
DNA (912bp)
protein (304aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TUE2_ALKMQ
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding {ECO:0000313|EMBL:ABR49810.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source=
DolZOral124_scaffold_1431_12
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8583..8930)
-----------------
DNA (348bp)
protein (116aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=R7B1M1_9BACE
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1431_13
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8943..10151)
-----------------
DNA (1209bp)
protein (403aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y7E8_9FIRM
ABC-2 type transporter
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1431_14
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10151..10993)
-----------------
DNA (843bp)
protein (281aa)
ABC transporter ATP-binding protein-putative sodium extrusion ABC transporter n=1 Tax=Haloplasma contractile SSD-17B RepID=U2EC03_9BACT
ABC transporter
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1431_15
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10965..11894)
-----------------
DNA (930bp)
protein (310aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QVQ4_SPHPG
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AEV29346.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" so
DolZOral124_scaffold_1431_16
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12191..12841)
-----------------
DNA (651bp)
protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSW2_ALKMQ
Chemotaxis protein CheY {ECO:0000313|EMBL:KGG80784.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
two component LuxR family transcriptional regulator
DolZOral124_scaffold_1431_17
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12858..13997)
-----------------
DNA (1140bp)
protein (380aa)
Histidine kinase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSW3_ALKMQ
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ABR49281.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF
DolZOral124_scaffold_1431_18
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14030..15832)
-----------------
DNA (1803bp)
protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GR22_FILAD
GTP-binding protein LepA
DolZOral124_scaffold_1431_19
unknown

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comp(16002..16373)
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

DolZOral124_scaffold_1431_20
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16470..16649)
-----------------
DNA (180bp)
protein (60aa)
30S ribosomal protein S21 n=1 Tax=Eubacterium infirmum F0142 RepID=H1PKV9_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae S
30S ribosomal protein S21
DolZOral124_scaffold_1431_21
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16863..17516)
-----------------
DNA (654bp)
protein (218aa)
Glycosyl transferase family 51 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQS5_CLOPH
Glycosyl transferase {ECO:0000313|EMBL:KEZ90563.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
glycosyl transferase family protein
DolZOral124_scaffold_1431_22
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17674..18906)
-----------------
DNA (1233bp)
protein (411aa)
Peptidase, U32 family {ECO:0000313|EMBL:KDR94144.1}; EC=3.4.-.- {ECO:0000313|EMBL:KDR94144.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
yrrO; protease YrrO (EC:3.4.-.-)
Putative protease YrrO n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B141_CLOA9
DolZOral124_scaffold_1431_23
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18922..19560)
-----------------
DNA (639bp)
protein (213aa)
O-methyltransferase {ECO:0000313|EMBL:EGY76633.1}; EC=2.1.1.104 {ECO:0000313|EMBL:EGY76633.1};; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;
O-methyltransferase n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D6B1_9FIRM
S-adenosylmethionine-dependent methyltransferase
DolZOral124_scaffold_1431_24
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19570..20601)
-----------------
DNA (1032bp)
protein (344aa)
Putative YceG protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG81462.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
aminodeoxychorismate lyase
DolZOral124_scaffold_1431_25
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20678..21283)
-----------------
DNA (606bp)
protein (202aa)
30S ribosomal protein S4 n=1 Tax=Orenia marismortui RepID=UPI00035E8866
30S ribosomal protein S4
30S ribosomal protein S4 B {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigen
DolZOral124_scaffold_1431_26
unknown

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comp(21231..21383)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

DolZOral124_scaffold_1431_27
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21528..23138)
-----------------
DNA (1611bp)
protein (537aa)
Sodium-dependent phosphate transporter n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CYH5_9CLOT
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KGG80311.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaeroba
Na/Pi-cotransporter II-like protein
DolZOral124_scaffold_1431_28
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23158..23625)
-----------------
DNA (468bp)
protein (156aa)
spoU2; RNA methyltransferase SpoU (EC:2.1.1.207)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAM
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AY10_CLOA9
DolZOral124_scaffold_1431_29
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23948..24094
-----------------
DNA (147bp)
protein (49aa)
UPI0003D6A024 related cluster n=1 Tax=unknown RepID=UPI0003D6A024
ykuU; thioredoxin-like protein YkuU
Thioredoxin-like protein YkuU {ECO:0000313|EMBL:AHD07371.1}; TaxID=697284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. lar
DolZOral124_scaffold_1431_30
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24245..24466
-----------------
DNA (222bp)
protein (74aa)
peroxiredoxin in rubredoxin operon (EC:1.11.1.15)
Putative peroxiredoxin in rubredoxin operon n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B4H2_CLOA9
Thioredoxin peroxidase {ECO:0000313|EMBL:KGG79604.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H
Displaying items 1-30 of 39 in total

View Taxonomy