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DolZOral124_scaffold_1624

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1624_1
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..584)
-----------------
DNA (582bp)
protein (194aa)
Uncharacterized protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GI20_CALEA
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_1624_2
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(847..1704)
-----------------
DNA (858bp)
protein (286aa)
Transcriptional regulator, RpiR family n=4 Tax=Thermoanaerobacter RepID=G2MWH3_9THEO
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EGD51322.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" sou
DolZOral124_scaffold_1624_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1704..2243)
-----------------
DNA (540bp)
protein (180aa)
2-oxoglutarate synthase subunit korC {ECO:0000313|EMBL:CCQ92670.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CCQ92670.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.3)
2-oxoglutarate synthase subunit korC n=1 Tax=Clostridium ultunense Esp RepID=M1YQ48_9CLOT
DolZOral124_scaffold_1624_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2240..3070)
-----------------
DNA (831bp)
protein (277aa)
2-oxoglutarate oxidoreductase, beta subunit {ECO:0000313|EMBL:EOD01096.1}; EC=1.2.7.3 {ECO:0000313|EMBL:EOD01096.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
2-oxoglutarate oxidoreductase, beta subunit n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CR01_9CLOT
2-oxoglutarate ferredoxin oxidoreductase subunit beta
DolZOral124_scaffold_1624_5
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3070..4209)
-----------------
DNA (1140bp)
protein (380aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRG8_ALKMQ
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABR48786.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" sourc
DolZOral124_scaffold_1624_6

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comp(4190..4417)
-----------------
DNA (228bp)
protein (76aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z6Z6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD40233.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
fdx9; hypothetical protein
DolZOral124_scaffold_1624_7
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(4697..5452)
-----------------
DNA (756bp)
protein (252aa)
stationary-phase survival protein SurE (EC:3.1.3.5)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=572544 spec
5'-nucleotidase SurE n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HA33_ILYPC
DolZOral124_scaffold_1624_8
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5470..5904)
-----------------
DNA (435bp)
protein (145aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
dut; dUTPase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Flavobacterium sp. F52 RepID=J1AFR2_9FLAO
DolZOral124_scaffold_1624_9
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5894..7165)
-----------------
DNA (1272bp)
protein (424aa)
Peptidase, M16 family {ECO:0000313|EMBL:EES75108.1}; EC=3.4.24.- {ECO:0000313|EMBL:EES75108.1};; TaxID=621372 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" sou
Peptidase, M16 family n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IW12_9BACL
pqqL; peptidase m16 domain-containing protein
DolZOral124_scaffold_1624_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7173..9266)
-----------------
DNA (2094bp)
protein (698aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=130428
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CVF6_9CLOT
pnp; polynucleotide phosphorylase
DolZOral124_scaffold_1624_11
Mogibacterium sp. CM50, Mogibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9495..9761)
-----------------
DNA (267bp)
protein (89aa)
30S ribosomal protein S15 n=1 Tax=Mogibacterium sp. CM50 RepID=J5U2M5_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=936375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae S
SSU ribosomal protein S15P
DolZOral124_scaffold_1624_12

Not on your lists

comp(9885..10808)
-----------------
DNA (924bp)
protein (308aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=77133 species="Bacteria; environmental
ribF; riboflavin biosynthesis protein RibF (EC:2.7.7.2)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F657_9BACT
DolZOral124_scaffold_1624_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10795..11709)
-----------------
DNA (915bp)
protein (305aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2A9_9CLOT
truB; tRNA pseudouridine synthase B
DolZOral124_scaffold_1624_14
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(11694..12671)
-----------------
DNA (978bp)
protein (326aa)
Phosphoesterase RecJ domain protein id=1744224 bin=GWB2_Clostridiales_37_7 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein Tax=GWB2_Clostridiales_37_7_curated
exopolyphosphatase-like protein
DolZOral124_scaffold_1624_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12675..13019)
-----------------
DNA (345bp)
protein (115aa)
Ribosome-binding factor A n=6 Tax=Clostridium difficile RepID=D5Q5W1_CLODI
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
rbfA; ribosome-binding factor A
DolZOral124_scaffold_1624_16
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13021..15774)
-----------------
DNA (2754bp)
protein (918aa)
Translation initiation factor IF-2 n=1 Tax=Eubacterium infirmum F0142 RepID=H1PNB4_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII.
infB; translation initiation factor IF-2
DolZOral124_scaffold_1624_17
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15792..16106)
-----------------
DNA (315bp)
protein (105aa)
Ribosomal protein n=1 Tax=Clostridium sp. CAG:798 RepID=R6WWZ6_9CLOT
ylxQ; Ribosomal protein
Ribosomal protein {ECO:0000313|EMBL:CBH21811.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (stra
DolZOral124_scaffold_1624_18
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16093..16365)
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B50017
Uncharacterized protein {ECO:0000313|EMBL:CCZ40085.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
DolZOral124_scaffold_1624_19
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16388..17740)
-----------------
DNA (1353bp)
protein (451aa)
Transcription termination factor NusA n=1 Tax=Thermincola potens (strain JR) RepID=D5XF10_THEPJ
transcription termination factor NusA
Tax=BJP_08E140C01_Clostridiales_46_19
DolZOral124_scaffold_1624_20
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17753..18244)
-----------------
DNA (492bp)
protein (164aa)
Ribosome maturation factor RimP n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=RIMP_ALKMQ
hypothetical protein
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metallire
DolZOral124_scaffold_1624_21
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18395..20095)
-----------------
DNA (1701bp)
protein (567aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=84022 species="Bacteria; Firmi
Arginine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWC9_9CLOT
argS; arginyl-tRNA synthetase
DolZOral124_scaffold_1624_22
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(20401..21216)
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002D400FC
Ribokinase {ECO:0000313|EMBL:KDE70044.1}; TaxID=1441737 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum DJ-2.;"
fructoselysine kinase
DolZOral124_scaffold_1624_23
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(21225..22244)
-----------------
DNA (1020bp)
protein (340aa)
SIS domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DAV4_9FIRM
Fructoselysine-6-P-deglycase {ECO:0000313|EMBL:KDE70043.1}; TaxID=1441737 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum DJ-2.;"
frlB; fructoselysine-6-P-deglycase
DolZOral124_scaffold_1624_24
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22522..27987)
-----------------
DNA (5466bp)
protein (1822aa)
LPXTG cell wall surface protein X-prolyl dipeptidylaminopeptidase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPJ5_9FIRM
Bacterial surface protein {ECO:0000313|EMBL:AII88070.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina
bacterial surface protein
DolZOral124_scaffold_1624_25
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28372..30042)
-----------------
DNA (1671bp)
protein (557aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B3D8EF
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDM68505.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
DolZOral124_scaffold_1624_26
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(30026..31774)
-----------------
DNA (1749bp)
protein (583aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QSB4_SPHPG
diguanylate cyclase
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AEV30044.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochae
DolZOral124_scaffold_1624_27
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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32082..33182
-----------------
DNA (1101bp)
protein (367aa)
Alanine racemase domain protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GSA8_FILAD
amino acid racemase
Amino acid racemase {ECO:0000313|EMBL:EFE28549.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35
DolZOral124_scaffold_1624_28
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33237..34748
-----------------
DNA (1512bp)
protein (504aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-g
Galactose-1-phosphate uridylyltransferase n=2 Tax=Clostridium cellulovorans RepID=D9SM94_CLOC7
DolZOral124_scaffold_1624_29
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34745..35359
-----------------
DNA (615bp)
protein (205aa)
Putative nudix hydrolase YeaB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARC0_9CLOT
NUDIX hydrolase {ECO:0000313|EMBL:KGG79603.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;
NUDIX hydrolase
Displaying 29 items

View Taxonomy