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DolZOral124_scaffold_1692

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1692_1
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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97..885
-----------------
DNA (789bp)
protein (263aa)
Beta-lactamase superfamily metal-dependent hydrolase id=3763918 bin=GWF2_Bacteroidetes_38_335 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
beta-lactamase superfamily metal-dependent hydrolase Tax=GWF2_Bacteroidetes_38_335_curated
metal-dependent hydrolase
DolZOral124_scaffold_1692_2
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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898..3000
-----------------
DNA (2103bp)
protein (701aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=GWD2_Bacteroidetes_33_33_curated
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG id=4439468 bin=GWA2_Bacteroidetes_33_15 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
DolZOral124_scaffold_1692_3
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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3297..4511
-----------------
DNA (1215bp)
protein (405aa)
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
DolZOral124_scaffold_1692_4
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4637..5422)
-----------------
DNA (786bp)
protein (262aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11R70_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG60094.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC
DolZOral124_scaffold_1692_5
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5560..6321)
-----------------
DNA (762bp)
protein (254aa)
RNA methyltransferase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B53AC
trmH1; SpoU rRNA methylase Tax=CG_Flavo_02
tRNA/rRNA methyltransferase
DolZOral124_scaffold_1692_6
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6692..6889
-----------------
DNA (198bp)
protein (66aa)
30S ribosomal protein S21 n=1 Tax=Alistipes sp. CAG:157 RepID=R5WQ89_9BACT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" sour
30S ribosomal protein S21
DolZOral124_scaffold_1692_7
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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6923..7810
-----------------
DNA (888bp)
protein (296aa)
Tyrosine recombinase XerC id=3914368 bin=GWF2_Bacteroidetes_33_38 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
site-specific recombinase XerD Tax=GWF2_Bacteroidetes_33_38_curated
recombinase
DolZOral124_scaffold_1692_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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7815..8117
-----------------
DNA (303bp)
protein (101aa)
sigma 54 modulation protein/ribosomal protein S30EA; K05808 putative sigma-54 modulation protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Sigma 54 modulation protein/ribosomal protein S30EA id=2182965 bin=GWE2_Bacteroidetes_32_14 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
ribosomal subunit interface protein
DolZOral124_scaffold_1692_trna_1
unknown

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8226..8299
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1692_9
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8308..8559)
-----------------
DNA (252bp)
protein (84aa)
id=3642646 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=3642646 Tax=GWF2_Bacteroidetes_41_31_curated
DolZOral124_scaffold_1692_trna_2
unknown

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8321..8402
-----------------
DNA (82bp)
transferRNA
DolZOral124_scaffold_1692_trna_3
unknown

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8412..8484
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_1692_trna_4
unknown

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8493..8564
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_1692_10
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8607..9794
-----------------
DNA (1188bp)
protein (396aa)
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DB3E
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacte
DolZOral124_scaffold_1692_trna_5
unknown

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9866..9938
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_1692_11
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10156..10728
-----------------
DNA (573bp)
protein (191aa)
Transcription termination/antitermination protein NusG n=2 Tax=Odoribacter RepID=H1DL29_9PORP
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Por
antitermination protein NusG
DolZOral124_scaffold_1692_12
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10791..11237
-----------------
DNA (447bp)
protein (149aa)
50S ribosomal protein L11 n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IV20_PSYTT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;
LSU ribosomal protein L11p (L12e) RplK
DolZOral124_scaffold_1692_13
Porphyromonas sp. CAG:1061, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11247..11945
-----------------
DNA (699bp)
protein (233aa)
50S ribosomal protein L1 n=1 Tax=Porphyromonas sp. CAG:1061 RepID=R5G7U3_9PORP
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262916 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; environmental samples.;" sour
50S ribosomal protein L1
DolZOral124_scaffold_1692_14
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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11973..12494
-----------------
DNA (522bp)
protein (174aa)
50S ribosomal protein L10 n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KP08_9FLAO
LSU ribosomal protein L10p (P0) RplJ Tax=RBG_13_Bacteroidetes_42_15_curated
50S ribosomal protein L10
DolZOral124_scaffold_1692_15
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12533..12907
-----------------
DNA (375bp)
protein (125aa)
50S ribosomal protein L7 n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248E662
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina at
rplL; 50S ribosomal protein L7/L12
DolZOral124_scaffold_1692_16
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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13003..16806
-----------------
DNA (3804bp)
protein (1268aa)
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWA2_Bacteroidetes_31_9b_curated
DNA-directed RNA polymerase subunit beta id=3691178 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
DNA-directed RNA polymerase subunit beta
DolZOral124_scaffold_1692_17
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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16847..21091
-----------------
DNA (4245bp)
protein (1415aa)
rpoC; putative DNA-directed RNA polymerase beta' chain; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=GWD2_Bacteroidetes_33_33_curated
rpoC; putative DNA-directed RNA polymerase beta' chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'''' id=1745566 bin=GWB2_Bacteroidetes_32_14 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
DolZOral124_scaffold_1692_18
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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21097..21417
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KP39_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KJS05249.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
DolZOral124_scaffold_1692_19

Not on your lists

21838..22626
-----------------
DNA (789bp)
protein (263aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVS0_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:KKN93299.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
short-chain dehydrogenase/reductase SDR
DolZOral124_scaffold_1692_20
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(22762..23511)
-----------------
DNA (750bp)
protein (250aa)
hypothetical protein AtheD1_16671 id=1923122 bin=GWB2_Bacteroidetes_32_14 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
DolZOral124_scaffold_1692_21
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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23756..25207
-----------------
DNA (1452bp)
protein (484aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C9S0_9BACE
exonuclease V subunit alpha Tax=GWB2_Bacteroidetes_41_8_curated
ATP-dependent endonuclease
DolZOral124_scaffold_1692_22
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25225..27288
-----------------
DNA (2064bp)
protein (688aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
Putative uncharacterized protein id=3825897 bin=GWF2_Bacteroidetes_33_16 species=uncultured Sphingobacteriales bacterium HF0130_33B19 genus=unknown taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
DolZOral124_scaffold_1692_23
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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27447..29501
-----------------
DNA (2055bp)
protein (685aa)
heat shock protein Hsp90 n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237BAD4
heat shock protein hsp90; K04079 molecular chaperone HtpG Tax=GWD2_Bacteroidetes_33_33_curated
molecular chaperone Hsp90
DolZOral124_scaffold_1692_24
Prevotella pallens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(29765..31189)
-----------------
DNA (1425bp)
protein (475aa)
Arginine-specific protease ArgI polyprotein {ECO:0000313|EMBL:EGQ20266.1}; EC=3.4.22.37 {ECO:0000313|EMBL:EGQ20266.1};; TaxID=997353 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevo
Uncharacterized protein n=1 Tax=Prevotella intermedia (strain 17) RepID=I1YRP5_PREI7
hypothetical protein
DolZOral124_scaffold_1692_25
unknown

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comp(31360..31485)
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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