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DolZOral124_scaffold_1857

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Displaying items 31-59 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1857_31
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32783..33283
-----------------
DNA (501bp)
protein (167aa)
UPF0301 protein NH8B_0468 n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IWE8_PSEUL
hypothetical protein
UPF0301 protein NH8B_0468 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudog
DolZOral124_scaffold_1857_32
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33305..33700
-----------------
DNA (396bp)
protein (132aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=562971 specie
Putative Holliday junction resolvase n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UCX4_ALCXX
Holliday junction resolvase
DolZOral124_scaffold_1857_33
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34541..34900)
-----------------
DNA (360bp)
protein (120aa)
Ribonuclease VapC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SKC2_9DELT
vapC; PIN domain-containing protein; K07062 Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
twitching motility protein PilT
DolZOral124_scaffold_1857_34
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34923..35270)
-----------------
DNA (348bp)
protein (116aa)
SpoVT/AbrB domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SKC1_9DELT
SpoVT/AbrB domain-containing protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
vapB; SpoVT/AbrB-like protein
DolZOral124_scaffold_1857_35
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35420..36385)
-----------------
DNA (966bp)
protein (322aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJC8_NEPCE
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein
hypothetical protein
DolZOral124_scaffold_1857_36
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36680..37600)
-----------------
DNA (921bp)
protein (307aa)
preprotein translocase subunit SecF n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EA24C7 rbh
preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" source="Basilea
DolZOral124_scaffold_1857_37
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37638..39551)
-----------------
DNA (1914bp)
protein (638aa)
Preprotein translocase subunit SecD n=1 Tax=Advenella kashmirensis W13003 RepID=V8QMI5_9BURK rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirens
secD; protein-export membrane protein SecD
DolZOral124_scaffold_1857_38
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39576..39902)
-----------------
DNA (327bp)
protein (109aa)
Preprotein translocase YajC subunit n=1 Tax=Sutterella sp. CAG:397 RepID=R7C213_9BURK
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CDD71378.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental sampl
hypothetical protein
DolZOral124_scaffold_1857_39
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40074..41213)
-----------------
DNA (1140bp)
protein (380aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QPC8_9BURK rbh
queuine tRNA-ribosyltransferase rbh
DolZOral124_scaffold_1857_40
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41210..42286)
-----------------
DNA (1077bp)
protein (359aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI00035F9ABE rbh
S-adenosylmethionine tRNA ribosyltransferase rbh
DolZOral124_scaffold_1857_41
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42329..42829)
-----------------
DNA (501bp)
protein (167aa)
Flavodoxin n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZPU1_9BACE
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
fld2; flavodoxin
DolZOral124_scaffold_1857_42
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42843..44240)
-----------------
DNA (1398bp)
protein (466aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=591023 species="Bacteria; Prote
Fumarate hydratase class II n=2 Tax=Actinobacillus minor RepID=B9CXD2_9PAST
fumarate hydratase
DolZOral124_scaffold_1857_43
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44360..45469)
-----------------
DNA (1110bp)
protein (370aa)
CobW/HypB/UreG, nucleotide-binding domain-containing protein 5 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U8B3_ADVKW rbh
CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
CobW/HypB/UreG, nucleotide-binding domain-containing protein 5 {ECO:0000313|EMBL:AFK61251.1}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" so
DolZOral124_scaffold_1857_44
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45466..45945)
-----------------
DNA (480bp)
protein (160aa)
Regulatory protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUW9_9BURK
ferric uptake regulator family protein
Regulatory protein {ECO:0000313|EMBL:ETF03090.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
DolZOral124_scaffold_1857_45
Pelistega sp. HM-7, Pelistega, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46113..46811
-----------------
DNA (699bp)
protein (233aa)
hypothetical protein n=1 Tax=Oligella ureolytica RepID=UPI00038079EE
ABC transporter {ECO:0000313|EMBL:ETD68922.1}; TaxID=1414851 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pelistega.;" source="Pelistega sp. HM-7.;"
ABC transporter ATP-binding protien
DolZOral124_scaffold_1857_46
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46804..47640
-----------------
DNA (837bp)
protein (279aa)
Zinc ABC transporter permease n=1 Tax=Pelistega sp. HM-7 RepID=V8FYY5_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL31996.1}; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" source="Basilea psittacipulmonis
DolZOral124_scaffold_1857_47
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47882..48289
-----------------
DNA (408bp)
protein (136aa)
molecular chaperone DnaK n=1 Tax=Oligella ureolytica RepID=UPI00036B8A51
molecular chaperone DnaK
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" sou
DolZOral124_scaffold_1857_48
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48349..49233
-----------------
DNA (885bp)
protein (295aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HRE6_ACHXA
hypothetical protein
DolZOral124_scaffold_1857_49
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49370..50044)
-----------------
DNA (675bp)
protein (225aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_00495};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_00495};; EC=3.1.3.1
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase n=2 Tax=Alcaligenes RepID=M5IUJ4_9BURK
DolZOral124_scaffold_1857_50
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50069..50755)
-----------------
DNA (687bp)
protein (229aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=513051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkho
Ribulose-phosphate 3-epimerase n=6 Tax=Burkholderia multivorans RepID=A9AJ38_BURM1 rbh
DolZOral124_scaffold_1857_51
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50880..52070
-----------------
DNA (1191bp)
protein (397aa)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI0003775F12
Membrane protein {ECO:0000313|EMBL:KGF30393.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis DNF00040.;
putative membrane-bound lytic murein transglycosylase
DolZOral124_scaffold_1857_52
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52172..52945
-----------------
DNA (774bp)
protein (258aa)
Thiol:disulfide interchange protein DsbC n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUV1_9BURK
Thiol:disulfide interchange protein DsbC {ECO:0000313|EMBL:ETF03123.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmi
thiol:disulfide interchange protein (periplasmic)
DolZOral124_scaffold_1857_53
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53041..53577
-----------------
DNA (537bp)
protein (179aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SYH2_ALCXX
adenine phosphoribosyltransferase
DolZOral124_scaffold_1857_54
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53666..53950
-----------------
DNA (285bp)
protein (95aa)
RNA polymerase subunit sigma-54 n=1 Tax=beta proteobacterium L13 RepID=UPI0003614B35
RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:KIA80089.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromoba
sigma-54 modulation protein
DolZOral124_scaffold_1857_55
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53980..54519
-----------------
DNA (540bp)
protein (180aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EFF78181.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFF78181.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X4K9_9BURK
PTS system nitrogen-specific IIA component,PtsN
DolZOral124_scaffold_1857_56
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54642..55274
-----------------
DNA (633bp)
protein (211aa)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI0003726F0F
Uncharacterized protein {ECO:0000313|EMBL:KGF31467.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis DNF
hypothetical protein
DolZOral124_scaffold_1857_57
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55418..55711)
-----------------
DNA (294bp)
protein (98aa)
Secreted peptidase, family S9 (EC:3.4.21.83)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2I0H2_9SPHI
Oligopeptidase B {ECO:0000313|EMBL:KGE14062.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium
DolZOral124_scaffold_1857_58
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55755..57353)
-----------------
DNA (1599bp)
protein (533aa)
Protease 2 {ECO:0000313|EMBL:KFF13086.1}; EC=3.4.21.83 {ECO:0000313|EMBL:KFF13086.1};; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacter
Secreted peptidase, family S9 (EC:3.4.21.83)
Protease II n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JYT5_9FLAO
DolZOral124_scaffold_1857_59
unknown

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57408..57554
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

Displaying items 31-59 of 59 in total

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