ggKbase home page

DolZOral124_scaffold_1859

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1859_28
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25048..25806
-----------------
DNA (759bp)
protein (253aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rR
Ribosomal RNA small subunit methyltransferase J n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RTH7_9GAMM
SAM-dependent methyltransferase
DolZOral124_scaffold_1859_29
unknown

Not on your lists

25849..26340
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

DolZOral124_scaffold_1859_30
unknown

Not on your lists

26571..27227
-----------------
DNA (657bp)
protein (219aa)

This feature has no annotations

DolZOral124_scaffold_1859_31
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27689..28672
-----------------
DNA (984bp)
protein (328aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FAD653 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL35755.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
hypothetical protein
DolZOral124_scaffold_1859_32
Photorhabdus luminescens, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28674..29207)
-----------------
DNA (534bp)
protein (178aa)
Complete genome; segment 14/17 n=1 Tax=Photorhabdus luminescens subsp. laumondii (strain TT01) RepID=Q7N0J4_PHOLL
hypothetical protein
Complete genome; segment 14/17 {ECO:0000313|EMBL:CAE16262.1}; TaxID=243265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photor
DolZOral124_scaffold_1859_33
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29204..29476)
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPH8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH23967.1}; TaxID=1398204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus b
DolZOral124_scaffold_1859_34
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29696..30838)
-----------------
DNA (1143bp)
protein (381aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase n=1 Tax=gamma proteobacterium BDW918 RepID=I2JKW8_9GAMM rbh
DolZOral124_scaffold_1859_35
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30858..31877)
-----------------
DNA (1020bp)
protein (340aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RTH9_9GAMM rbh
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
DolZOral124_scaffold_1859_36
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31900..32244)
-----------------
DNA (345bp)
protein (115aa)
ArsC family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RTI0_9GAMM
A glutathione-dependent thiol reductase {ECO:0000313|EMBL:KGE04008.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra
hypothetical protein
DolZOral124_scaffold_1859_37
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32372..32803
-----------------
DNA (432bp)
protein (144aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8M9L6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET89153.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
DolZOral124_scaffold_1859_38
Gordonia sihwensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32825..33484
-----------------
DNA (660bp)
protein (220aa)
Putative TetR family transcriptional regulator n=1 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LGK0_9ACTO
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAC59188.1}; TaxID=1223544 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sihwensis N
fadR; TetR family transcriptional regulator
DolZOral124_scaffold_1859_39
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33528..34679)
-----------------
DNA (1152bp)
protein (384aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S280_9GAMM rbh
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EEB77241.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma prot
acyl-CoA dehydrogenase
DolZOral124_scaffold_1859_40
unknown

Not on your lists

34709..34900
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

DolZOral124_scaffold_1859_41
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34878..35678
-----------------
DNA (801bp)
protein (267aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ05_PARL1 rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:GAK43922.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
enoyl-CoA hydratase/isomerase
DolZOral124_scaffold_1859_42
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36105..36584
-----------------
DNA (480bp)
protein (160aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KG02_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED32768.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
hypothetical protein
DolZOral124_scaffold_1859_43
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36795..38690
-----------------
DNA (1896bp)
protein (632aa)
AsmA family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZ88_9GAMM rbh
AsmA family protein {ECO:0000313|EMBL:EEB78269.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
hypothetical protein
DolZOral124_scaffold_1859_44
unknown

Not on your lists

38797..39630
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein
DolZOral124_scaffold_1859_45
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39851..42601)
-----------------
DNA (2751bp)
protein (917aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent hel
superfamily II DNA/RNA helicase, SNF2 family (EC:3.6.1.-)
RNA polymerase-associated protein RapA n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWY5_9GAMM rbh
DolZOral124_scaffold_1859_46
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42656..43465)
-----------------
DNA (810bp)
protein (270aa)
Hydrolase, TatD family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWY6_9GAMM rbh
Hydrolase, TatD family {ECO:0000313|EMBL:EEB79225.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
TatD-related deoxyribonuclease
DolZOral124_scaffold_1859_47
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43471..44046)
-----------------
DNA (576bp)
protein (192aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KFR5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED32681.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
hypothetical protein
DolZOral124_scaffold_1859_48
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44352..44564)
-----------------
DNA (213bp)
protein (71aa)
cold-shock protein n=1 Tax=Spongiibacter tropicus RepID=UPI0003B3A85D
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:AKH70167.1}; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" source="S
cold-shock DNA-binding domain-containing protein
DolZOral124_scaffold_1859_49
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(44668..47445)
-----------------
DNA (2778bp)
protein (926aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ6_9GAMM rbh
valyl-tRNA synthetase
DolZOral124_scaffold_1859_50
Shewanella sp. YQH10, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47817..48416
-----------------
DNA (600bp)
protein (200aa)
hypothetical protein n=1 Tax=Pseudomonas caeni RepID=UPI0003B5266A
Uncharacterized protein {ECO:0000313|EMBL:KFZ37925.1}; TaxID=1515746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. YQH10
hypothetical protein
DolZOral124_scaffold_1859_51
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48662..49927)
-----------------
DNA (1266bp)
protein (422aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|
6-phosphofructokinase n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LEI1_9GAMM rbh
6-phosphofructokinase
DolZOral124_scaffold_1859_52
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50114..51499
-----------------
DNA (1386bp)
protein (462aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S079_9GAMM rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:EEB77803.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;"
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
DolZOral124_scaffold_1859_53
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51492..54080
-----------------
DNA (2589bp)
protein (863aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S093_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEB77877.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2
hypothetical protein
Displaying items 31-56 of 56 in total

View Taxonomy