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DolZOral124_scaffold_1928

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1928_1
unknown

Not on your lists

1..111
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

DolZOral124_scaffold_1928_trna_2
unknown

Not on your lists

comp(7..99)
-----------------
DNA (93bp)
transferRNA
DolZOral124_scaffold_1928_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(103..678)
-----------------
DNA (576bp)
protein (192aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VWI0_CLOBI
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
acyl-phosphate glycerol-3-phosphate acyltransferase
DolZOral124_scaffold_1928_3
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

798..2138
-----------------
DNA (1341bp)
protein (447aa)
Potassium transporter ATPase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PXU4_CLOSD
ktrB; potassium transporter ATPase
Potassium transporter ATPase {ECO:0000313|EMBL:CBH21259.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium stickl
DolZOral124_scaffold_1928_4
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2138..2806
-----------------
DNA (669bp)
protein (223aa)
Potassium uptake protein, integral membrane component, KtrA n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQH9_9CLOT
Potassium uptake protein, integral membrane component, KtrA {ECO:0000313|EMBL:CDF58472.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" sour
TrkA-N domain-containing protein
DolZOral124_scaffold_1928_5
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2784..3494
-----------------
DNA (711bp)
protein (237aa)
spoU1; tRNA/rRNA methyltransferase SpoU (EC:2.1.1.-)
tRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:AFS77928.1}; EC=2.1.1.- {ECO:0000313|EMBL:AFS77928.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" sourc
tRNA/rRNA methyltransferase SpoU n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AVQ2_CLOA9
DolZOral124_scaffold_1928_6
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3511..4542
-----------------
DNA (1032bp)
protein (344aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Clostridiales RepID=E0QH44_9FIRM rbh
DolZOral124_scaffold_1928_7
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4539..6875
-----------------
DNA (2337bp)
protein (779aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UT78_9FIRM
DolZOral124_scaffold_1928_8
unknown

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6859..7266
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

DolZOral124_scaffold_1928_9
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7266..9602
-----------------
DNA (2337bp)
protein (779aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=575609 species="Bacteria; Firmi
Endonuclease MutS2 n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N5H5_9FIRM
recombination and DNA strand exchange inhibitor protein
DolZOral124_scaffold_1928_10
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9594..10331)
-----------------
DNA (738bp)
protein (246aa)
protease n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0002481B34
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S54, rhomboid domain {ECO:0000313|EMBL:ADZ84968.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lento
DolZOral124_scaffold_1928_11
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10405..12102
-----------------
DNA (1698bp)
protein (566aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1219626 species="Bacteria; Fir
Arginine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWC9_9CLOT
argS; arginyl-tRNA synthetase
DolZOral124_scaffold_1928_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12114..12953
-----------------
DNA (840bp)
protein (280aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZFY7_9CLOT
ATP-NAD kinase family protein
DolZOral124_scaffold_1928_13
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12940..13998
-----------------
DNA (1059bp)
protein (353aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003644428
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ABR47901.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens
DolZOral124_scaffold_1928_14
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14003..14467
-----------------
DNA (465bp)
protein (155aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XF84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14630.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
Appr-1-p processing domain-containing protein
DolZOral124_scaffold_1928_15
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14548..15771
-----------------
DNA (1224bp)
protein (408aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.52)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579, ECO:0000313|EMBL:CBK83616.1};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostrid
Beta-glucosidase-related glycosidases n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HFD3_9FIRM rbh
DolZOral124_scaffold_1928_trna_1
unknown

Not on your lists

15849..15922
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1928_16
Dialister micraerophilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


16171..17457
-----------------
DNA (1287bp)
protein (429aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
histidyl-tRNA synthetase n=1 Tax=Orenia marismortui RepID=UPI000382D454
histidyl-tRNA synthetase
DolZOral124_scaffold_1928_17
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17450..19192
-----------------
DNA (1743bp)
protein (581aa)
aspS; aspartyl-tRNA synthetase AspS (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AVG7_9CLOT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KGG81505.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
DolZOral124_scaffold_1928_18
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19194..19604
-----------------
DNA (411bp)
protein (137aa)
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1928_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19592..20818
-----------------
DNA (1227bp)
protein (409aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SL33_CLOC7
beta-eliminating lyase family protein
DolZOral124_scaffold_1928_20
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20862..21710)
-----------------
DNA (849bp)
protein (283aa)
dacF; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDM69633.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CDM69633.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=4 Tax=Bacillus thuringiensis RepID=C3GU27_BACTU
DolZOral124_scaffold_1928_21
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21903..22946
-----------------
DNA (1044bp)
protein (348aa)
dihydrodipicolinate reductase n=1 Tax=Treponema primitia RepID=UPI0002554DDA
dihydrodipicolinate reductase
Dihydrodipicolinate reductase {ECO:0000313|EMBL:AEF85071.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887
DolZOral124_scaffold_1928_22
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22950..23252
-----------------
DNA (303bp)
protein (101aa)
2-amino-4-ketopentanoate thiolase, alpha subunit n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQ23_9CLOT
2-amino-4-ketopentanoate thiolase subunit alpha {ECO:0000313|EMBL:EYE89648.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidice
ortA; 2-amino-4-ketopentanoate thiolase (AKPT), alpha subunit
DolZOral124_scaffold_1928_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23245..24633
-----------------
DNA (1389bp)
protein (463aa)
2-amino-4-ketopentanoate thiolase, beta subunit n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CGE6_9CLOT
2-amino-4-ketopentanoate thiolase, beta subunit {ECO:0000313|EMBL:EOD01385.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Cald
pyridoxal-5'-phosphate-dependent protein beta subunit
DolZOral124_scaffold_1928_24
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24635..25000
-----------------
DNA (366bp)
protein (122aa)
D-ornithine aminomutase S component n=1 Tax=Clostridium difficile E19 RepID=U3YS74_CLODI
Ornithine aminomutase {ECO:0000313|EMBL:KJF28068.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
oraS; D-ornithine aminomutase S component
DolZOral124_scaffold_1928_25
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

25000..27201
-----------------
DNA (2202bp)
protein (734aa)
D-ornithine aminomutase E component n=1 Tax=Fusobacterium nucleatum subsp. animalis D11 RepID=D6BCX4_FUSNU
D-ornithine aminomutase E component {ECO:0000313|EMBL:EFD80021.2}; TaxID=556264 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum sub
oraE; D-ornithine aminomutase E component
DolZOral124_scaffold_1928_26
Fusobacterium sp. CM22, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

27198..28556
-----------------
DNA (1359bp)
protein (453aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P51 RepID=T4RWE8_CLODI
reactivating factor for adenosylcobalamine-dependent D-ornithine aminomutase
Uncharacterized protein {ECO:0000313|EMBL:EUB28622.1}; TaxID=936563 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. CM22.;"
DolZOral124_scaffold_1928_27
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

28558..29610
-----------------
DNA (1053bp)
protein (351aa)
orr; ornithine racemase (EC:5.1.1.12)
Ornithine racemase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQ19_9CLOT
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
DolZOral124_scaffold_1928_28
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29734..30765
-----------------
DNA (1032bp)
protein (344aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IY64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23867.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Predicted transcriptional regulators
Displaying items 1-30 of 47 in total

View Taxonomy