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DolZOral124_scaffold_203

Search features with annotation key words

Displaying items 31-60 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_203_31
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45583..45783
-----------------
DNA (201bp)
protein (67aa)
Probable cold-shock protein id=1882582 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=GWB2_Desulfobacterales_56_26_curated
cold shock protein
DolZOral124_scaffold_203_32
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46087..47016
-----------------
DNA (930bp)
protein (310aa)
hypothetical protein; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=GWB2_Desulfobacterales_56_26_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZHJ4_9BACT
hypothetical protein
DolZOral124_scaffold_203_33
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47056..48633
-----------------
DNA (1578bp)
protein (526aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4KWS7_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ09648.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
hypothetical protein
DolZOral124_scaffold_203_34
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48696..49043
-----------------
DNA (348bp)
protein (116aa)
Cytoplasmic protein {ECO:0000313|EMBL:KGO35468.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp.
hypothetical protein id=47019 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
hypothetical protein
DolZOral124_scaffold_203_35
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49797..50717)
-----------------
DNA (921bp)
protein (307aa)
Related to ribokinase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ALS2_DESPS rbh
ribokinase rbh
Related to ribokinase {ECO:0000313|EMBL:CAG36703.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psyc
DolZOral124_scaffold_203_36
Pseudomonas lutea, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50779..51858)
-----------------
DNA (1080bp)
protein (360aa)
Deoxyribose mutarotase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDV1_AZOL4
Deoxyribose mutarotase {ECO:0000313|EMBL:KGF64593.1}; TaxID=243924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas lutea.;
deoM; deoxyribose mutarotase
DolZOral124_scaffold_203_37
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51874..52884)
-----------------
DNA (1011bp)
protein (337aa)
Sugar ABC transporter permease component (RbsC-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCZ3_AZOL4
ABC transporter permease {ECO:0000313|EMBL:KJR61834.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum t
sugar ABC transporter; permease component (RbsC-like)
DolZOral124_scaffold_203_38
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52877..53854)
-----------------
DNA (978bp)
protein (326aa)
Sugar ABC transporter, permease component (RbsC-like) protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LSI0_9PROT
sugar ABC transporter, permease component (RbsC-like) protein
Sugar ABC transporter, permease component (RbsC-like) protein {ECO:0000313|EMBL:AJD53558.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae;
DolZOral124_scaffold_203_39
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53865..55361)
-----------------
DNA (1497bp)
protein (499aa)
ABC-type sugar transport system, ATPase component n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VH50_9RHIZ
Lipase {ECO:0000313|EMBL:KJR61836.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
ABC transporter
DolZOral124_scaffold_203_40
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55433..56485)
-----------------
DNA (1053bp)
protein (351aa)
Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2TEH5_RHORU rbh
periplasmic binding protein/LacI transcriptional regulator rbh
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ABC23102.1}; Flags: Precursor;; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhod
DolZOral124_scaffold_203_41
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(56555..57238)
-----------------
DNA (684bp)
protein (228aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4) Tax=GWC2_Spirochaetes_52_13_curated
Deoxyribose-phosphate aldolase id=3923009 bin=GWC2_Spirochaete_52_13 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
deoxyribose-phosphate aldolase
DolZOral124_scaffold_203_42
Pseudomonas sp. Ag1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57310..58071)
-----------------
DNA (762bp)
protein (254aa)
Regulatory protein, DeoR n=2 Tax=Pseudomonas RepID=J1IIS4_9PSED
Regulatory protein, DeoR {ECO:0000313|EMBL:EJF70865.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
DeoR family transcriptional regulator
DolZOral124_scaffold_203_43
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58096..59844)
-----------------
DNA (1749bp)
protein (583aa)
Ribulo-/ribitol kinase {ECO:0000313|EMBL:CBS89757.1}; EC=2.7.1.16 {ECO:0000313|EMBL:CBS89757.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillace
Ribulo-/ribitol kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDV3_AZOL4 rbh
araB; ribulo-/ribitol kinase
DolZOral124_scaffold_203_44

Not on your lists

comp(60078..60656)
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z8Y2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD34339.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
DolZOral124_scaffold_203_45

Not on your lists

61430..62977
-----------------
DNA (1548bp)
protein (516aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YMM8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD38332.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cytochrome D ubiquinol oxidase, subunit I
DolZOral124_scaffold_203_46
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62979..64112
-----------------
DNA (1134bp)
protein (378aa)
Cytochrome C oxidase assembly protein {ECO:0000313|EMBL:KJS00380.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbace
Cytochrome d ubiquinol oxidase, subunit II id=2306889 bin=GWB2_Desulfobacterales_56_26 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
cytochrome d ubiquinol oxidase, subunit II
DolZOral124_scaffold_203_47
unknown

Not on your lists

64191..64286
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

DolZOral124_scaffold_203_48
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64474..64941)
-----------------
DNA (468bp)
protein (156aa)
phosphatidylglycerophosphatase A-like protein (EC:3.1.3.27) Tax=GWB2_Desulfobacterales_56_26_curated
phosphatidylglycerophosphatase A-like protein (EC:3.1.3.27)
Related to phosphatidylglycerophosphatase A id=2306901 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_203_49
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65004..66014)
-----------------
DNA (1011bp)
protein (337aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1629713 species="
Methionyl-tRNA formyltransferase id=2306905 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
methionyl-tRNA formyltransferase
DolZOral124_scaffold_203_50
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66070..66576)
-----------------
DNA (507bp)
protein (169aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase id=2306907 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_203_51
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66934..67539
-----------------
DNA (606bp)
protein (202aa)
hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=GWB2_Desulfobacterales_56_26_curated
Glycerol-3-phosphate acyltransferase id=2306909 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolZOral124_scaffold_203_52
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67812..68777
-----------------
DNA (966bp)
protein (322aa)
alcohol dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=CG_Delta_02
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6Q1_GEOUR rbh
quinone oxidoreductase
DolZOral124_scaffold_203_53
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68933..70567)
-----------------
DNA (1635bp)
protein (545aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=GWB2_Desulfobacterales_56_26_curated
Probable delta-1-pyrroline-5-carboxylate dehydrogenase id=1726937 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
delta-1-pyrroline-5-carboxylate dehydrogenase
DolZOral124_scaffold_203_54
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70666..71577)
-----------------
DNA (912bp)
protein (304aa)
proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWB2_Desulfobacterales_56_26_curated
Related to proline dehydrogenase id=1726935 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
proline dehydrogenase
DolZOral124_scaffold_203_55
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71783..72451
-----------------
DNA (669bp)
protein (223aa)
Transcriptional regulator, GntR family id=1726933 bin=GWB2_Desulfobacterales_56_26 species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
GntR family transcriptional regulator Tax=GWB2_Desulfobacterales_56_26_curated
GntR family transcriptional regulator
DolZOral124_scaffold_203_56
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72553..73728)
-----------------
DNA (1176bp)
protein (392aa)
oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=GWB2_Desulfobacterales_56_26_curated
Related to oxygen-independent coproporphyrinogen III oxidase id=1726931 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
putative oxygen-independent coproporphyrinogen III oxidase
DolZOral124_scaffold_203_57
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73680..74429)
-----------------
DNA (750bp)
protein (250aa)
DNA repair protein RadC {ECO:0000313|EMBL:KGO35368.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
Related to DNA repair protein RadC id=1726929 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DNA repair protein radc
DolZOral124_scaffold_203_58
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74448..75872)
-----------------
DNA (1425bp)
protein (475aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=1726928 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
DolZOral124_scaffold_203_59
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75930..76472)
-----------------
DNA (543bp)
protein (181aa)
Putative uncharacterized protein id=1726927 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
DolZOral124_scaffold_203_60
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76682..77290)
-----------------
DNA (609bp)
protein (203aa)
DNA recombination-dependent growth factor C {ECO:0000313|EMBL:KJS00079.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfob
Putative uncharacterized protein id=1726926 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Displaying items 31-60 of 78 in total

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