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DolZOral124_scaffold_350

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_350_1
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..200
-----------------
DNA (198bp)
protein (66aa)
Phage portal protein, HK97 family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CY38_9RHOB
Phage portal protein, HK97 family {ECO:0000313|EMBL:EEX10439.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacte
portal protein, HK97 family
DolZOral124_scaffold_350_2
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193..423
-----------------
DNA (231bp)
protein (77aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FNY1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM71984.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. Az
hypothetical protein
DolZOral124_scaffold_350_3
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

475..1029
-----------------
DNA (555bp)
protein (185aa)
HK97 family phage prohead protease n=1 Tax=Citreicella sp. 357 RepID=I1ARQ0_9RHOB
HK97 family phage prohead protease {ECO:0000313|EMBL:EIE49171.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreic
phage prohead protease, HK97 family
DolZOral124_scaffold_350_4
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1066..2247
-----------------
DNA (1182bp)
protein (394aa)
Major capsid protein, HK97 family n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FNX9_9RHOB rbh
Capsid protein {ECO:0000313|EMBL:KIC49298.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
hypothetical protein
DolZOral124_scaffold_350_5
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2392..2991
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W385_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ25120.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 21
hypothetical protein
DolZOral124_scaffold_350_6
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2988..3326
-----------------
DNA (339bp)
protein (113aa)
Head-tail adaptor, putative n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FNX7_9RHOB
Head-tail adaptor, putative {ECO:0000313|EMBL:EDM71980.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp
hypothetical protein
DolZOral124_scaffold_350_7
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3323..3733
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q164Q3_ROSDO
hypothetical protein
Gene transfer agent protein {ECO:0000313|EMBL:KGB83024.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp.
DolZOral124_scaffold_350_8
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3761..4177
-----------------
DNA (417bp)
protein (139aa)
UPI0003D1C5E2 related cluster n=1 Tax=unknown RepID=UPI0003D1C5E2
Contig5, whole genome shotgun sequence {ECO:0000313|EMBL:ETA52038.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteracea
major tail protein, TP901-1 family
DolZOral124_scaffold_350_9
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4216..4515
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3JZ42_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA09745.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E
putative gene transfer agent protein
DolZOral124_scaffold_350_10
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4502..4705
-----------------
DNA (204bp)
protein (68aa)
Gene Transfer Agent protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QKG4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGM48856.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22I
GTA protein ORFG10b
DolZOral124_scaffold_350_11
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4698..5360
-----------------
DNA (663bp)
protein (221aa)
tail protein n=1 Tax=Ruegeria conchae RepID=UPI000237A99A rbh
Tail protein {ECO:0000313|EMBL:KIC43061.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;"
gene transfer agent tail tape measure protein
DolZOral124_scaffold_350_12
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5379..6011
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJY1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAP77662.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhi
hypothetical protein
DolZOral124_scaffold_350_13
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6011..6895
-----------------
DNA (885bp)
protein (295aa)
Gene Transfer Agent FAD/FMN-containing dehydrogenase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9S6V4_9RHOB rbh
Gene Transfer Agent FAD/FMN-containing dehydrogenase {ECO:0000313|EMBL:EPX81949.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;
hypothetical protein
DolZOral124_scaffold_350_14
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6897..7340
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJY3_9RHOB
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_350_15
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7340..11260
-----------------
DNA (3921bp)
protein (1307aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI000255969D rbh
Phage host specificity protein {ECO:0000313|EMBL:KGM48851.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola
hypothetical protein
DolZOral124_scaffold_350_16
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11571..12578
-----------------
DNA (1008bp)
protein (336aa)
serine O-acetyltransferase (EC:2.3.1.30)
UPI0003D1C5EB related cluster n=1 Tax=unknown RepID=UPI0003D1C5EB rbh
Contig5, whole genome shotgun sequence {ECO:0000313|EMBL:ETA52062.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteracea
DolZOral124_scaffold_350_17
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12735..14120)
-----------------
DNA (1386bp)
protein (462aa)
ArgE/DapE/Acy1 family protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AV94_9RHOB rbh
ArgE/DapE/Acy1 family protein {ECO:0000313|EMBL:EDZ40811.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacteriu
hypothetical protein
DolZOral124_scaffold_350_18
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14553..15776
-----------------
DNA (1224bp)
protein (408aa)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:000025
hemA-1; 5-aminolevulinic acid synthase (EC:2.3.1.37)
5-aminolevulinate synthase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FNN1_9RHOB rbh
DolZOral124_scaffold_350_19
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15887..17131
-----------------
DNA (1245bp)
protein (415aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase {ECO:0000313|EMBL:EDM71883.1}; EC=1.17.7.1 {ECO:0000313|EMBL:EDM71883.1};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rho
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FNN0_9RHOB rbh
hypothetical protein
DolZOral124_scaffold_350_20
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17233..18354
-----------------
DNA (1122bp)
protein (374aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00030E39AF rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
DolZOral124_scaffold_350_21
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18488..19237)
-----------------
DNA (750bp)
protein (250aa)
27 kDa outer membrane protein, putative n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FP09_PELBH
27 kDa outer membrane protein, putative {ECO:0000313|EMBL:EAU45894.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pel
DSBA oxidoreductase
DolZOral124_scaffold_350_22
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19241..20590)
-----------------
DNA (1350bp)
protein (450aa)
Peptidase, M48 family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SP33_9RHOB rbh
Peptidase, M48 family protein {ECO:0000313|EMBL:EAP76223.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius n
hypothetical protein
DolZOral124_scaffold_350_23
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20683..21828
-----------------
DNA (1146bp)
protein (382aa)
Aminotransferase, class I and II n=1 Tax=Roseovarius sp. TM1035 RepID=A6E040_9RHOB rbh
Aminotransferase, class I and II {ECO:0000313|EMBL:EDM31963.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovari
aminotransferase
DolZOral124_scaffold_350_24
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21902..23119
-----------------
DNA (1218bp)
protein (406aa)
N-acetylmuramoyl-L-alanine amidase, family 3 n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRI9_9RHOB rbh
N-acetylmuramoyl-L-alanine amidase, family 3 {ECO:0000313|EMBL:EDM71407.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" sourc
N-acetylmuramoyl-L-alanine amidase, family 3
DolZOral124_scaffold_350_25
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23213..25780
-----------------
DNA (2568bp)
protein (856aa)
mrcA; penicillin-binding protein 1A (EC:2.4.2.-)
Penicillin-binding protein, 1A family n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AYU7_9RHOB rbh
Penicillin-binding protein 1A {ECO:0000313|EMBL:KEJ87949.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitoba
DolZOral124_scaffold_350_26
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26110..27186
-----------------
DNA (1077bp)
protein (359aa)
Protein RecA n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QQB9_9RHOB
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1449351 species="Bacteria; Proteoba
recA; recombinase A
DolZOral124_scaffold_350_27
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27183..27731
-----------------
DNA (549bp)
protein (183aa)
Uncharacterized protein n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GHA2_RUEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF63964.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (strain
DolZOral124_scaffold_350_28
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27777..30485
-----------------
DNA (2709bp)
protein (903aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7) rbh
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_
Alanine--tRNA ligase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=SYA_RUEPO rbh
DolZOral124_scaffold_350_29
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30490..30777
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ERJ3_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EBA17899.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
DolZOral124_scaffold_350_30
unknown

Not on your lists

comp(30841..31023)
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

Displaying items 1-30 of 69 in total

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