ggKbase home page

DolZOral124_scaffold_350

Search features with annotation key words

Displaying items 31-60 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_350_31
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31352..33169)
-----------------
DNA (1818bp)
protein (606aa)
GTP-binding protein TypA n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ERJ1_9RHOB rbh
GTP-binding protein TypA {ECO:0000313|EMBL:EBA17897.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. S
GTP-binding protein TypA rbh
DolZOral124_scaffold_350_32
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33304..35049
-----------------
DNA (1746bp)
protein (582aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=89187 species="Bacteria; Prote
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SPT0_9RHOB rbh
DolZOral124_scaffold_350_33
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35130..36080
-----------------
DNA (951bp)
protein (317aa)
Sporulation related protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FS18_9RHOB rbh
Sporulation related protein {ECO:0000313|EMBL:EDM70984.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp
hypothetical protein
DolZOral124_scaffold_350_34
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36077..37096
-----------------
DNA (1020bp)
protein (340aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodoba
Beta-N-acetylhexosaminidase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CYQ9_9RHOB rbh
beta-N-acetylhexosaminidase, putative
DolZOral124_scaffold_350_35
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37152..37940
-----------------
DNA (789bp)
protein (263aa)
Segregation and condensation protein A n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QVN3_9RHOB rbh
Chromosome segregation protein ScpA {ECO:0000313|EMBL:KIC48603.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tatey
hypothetical protein
DolZOral124_scaffold_350_36
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37945..38619
-----------------
DNA (675bp)
protein (225aa)
Putative transcriptional regulator n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FS15_9RHOB rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="R
scpB; segregation and condensation protein B
DolZOral124_scaffold_350_37
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38731..38919
-----------------
DNA (189bp)
protein (63aa)
UPI0003D1B2F5 related cluster n=1 Tax=unknown RepID=UPI0003D1B2F5
Uncharacterized protein {ECO:0000313|EMBL:KHQ53888.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. U
DolZOral124_scaffold_350_38
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39060..40196)
-----------------
DNA (1137bp)
protein (379aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002E2C9C1 rbh
MFS transporter {ECO:0000313|EMBL:KIC20779.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
major facilitator superfamily protein
DolZOral124_scaffold_350_39
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41280..42356)
-----------------
DNA (1077bp)
protein (359aa)
2-deoxycytidine 5-triphosphate deaminase {ECO:0000313|EMBL:KID10210.1}; EC=3.5.4.13 {ECO:0000313|EMBL:KID10210.1};; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterale
2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13)
2''''-deoxycytidine 5''''-triphosphate deaminase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00031CFC04 rbh
DolZOral124_scaffold_350_40
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42569..44278)
-----------------
DNA (1710bp)
protein (570aa)
PA14 domain protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AY13_9RHOB
PA14 domain protein {ECO:0000313|EMBL:EDZ42477.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2083
PA14 domain protein
DolZOral124_scaffold_350_trna_2
unknown

Not on your lists

comp(44686..44759)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_350_41
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44878..46245)
-----------------
DNA (1368bp)
protein (456aa)
MerR family transcriptional regulator n=1 Tax=Citreicella sp. 357 RepID=I1B0E3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEJ97738.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
MerR family transcriptional regulator
DolZOral124_scaffold_350_42
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46261..46563)
-----------------
DNA (303bp)
protein (101aa)
integration host factor subunit alpha n=1 Tax=Oceanicola sp. S124 RepID=UPI000255818D
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=391589 species="Bacteria; Proteobacter
ihfA; integration host factor subunit alpha
DolZOral124_scaffold_350_43
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46703..47677)
-----------------
DNA (975bp)
protein (325aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Roseovarius sp. 217 RepID=A3VX66_9RHOB rbh
DolZOral124_scaffold_350_44
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47677..48852)
-----------------
DNA (1176bp)
protein (392aa)
Phosphate acyltransferase n=1 Tax=Sagittula stellata E-37 RepID=A3K1X3_9RHOB rbh
plsX; fatty acid/phospholipid synthesis protein PlsX
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_350_45
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(48879..49085)
-----------------
DNA (207bp)
protein (69aa)
UPI0003D1AF3A related cluster n=1 Tax=unknown RepID=UPI0003D1AF3A
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacteri
rpmF; 50S ribosomal protein L32
DolZOral124_scaffold_350_46
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(49285..49875)
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI000237B23A
50S ribosomal protein L34 {ECO:0000313|EMBL:KIC42980.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R
hypothetical protein
DolZOral124_scaffold_350_47
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50008..50466
-----------------
DNA (459bp)
protein (153aa)
Lipoprotein, SmpA/OmlA family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SPR7_9RHOB
Lipoprotein, SmpA/OmlA family protein {ECO:0000313|EMBL:EAP76457.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseo
lipoprotein, SmpA/OmlA family
DolZOral124_scaffold_350_48
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50587..51324
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQK0_RUEPO rbh
Ornithine-acyl[acyl carrier protein] N-acyltransferase {ECO:0000313|EMBL:KHQ53878.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticocc
hypothetical protein
DolZOral124_scaffold_350_49
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51561..53306
-----------------
DNA (1746bp)
protein (582aa)
Holdfast attachment protein C n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CYS3_9RHOB rbh
Elongation factor 3 {ECO:0000313|EMBL:KIC48614.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S
ABC transporter, ATP-binding protein
DolZOral124_scaffold_350_50
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53320..53538)
-----------------
DNA (219bp)
protein (73aa)
Putative uncharacterized protein n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DD27_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EET48158.1}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" source="Thalassobium sp.
hypothetical protein
DolZOral124_scaffold_350_51
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53691..53951
-----------------
DNA (261bp)
protein (87aa)
UPF0335 protein MED193_05544 n=1 Tax=Roseobacter sp. MED193 RepID=A3X8M4_9RHOB
UPF0335 protein RA27_01005 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp.
hypothetical protein
DolZOral124_scaffold_350_52
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54239..55063)
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557D53 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPX85012.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus D
hypothetical protein
DolZOral124_scaffold_350_53
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55060..55530)
-----------------
DNA (471bp)
protein (157aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRD2_9RHOB
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EDM71350.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
peroxiredoxin
DolZOral124_scaffold_350_54
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55682..59032
-----------------
DNA (3351bp)
protein (1117aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRD3_9RHOB rbh
Uncharacterized protein involved in outer membrane biogenesis {ECO:0000313|EMBL:KGM86883.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ro
Uncharacterized protein involved in outer membrane biogenesis
DolZOral124_scaffold_350_55
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59038..60099
-----------------
DNA (1062bp)
protein (354aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NPZ1_9RHOB rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
DolZOral124_scaffold_350_56
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60293..61555
-----------------
DNA (1263bp)
protein (421aa)
major facilitator transporter n=1 Tax=Ruegeria conchae RepID=UPI000237AC78 rbh
Major facilitator transporter {ECO:0000313|EMBL:KGM48316.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola s
major facilitator transporter
DolZOral124_scaffold_350_57
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61670..62245
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI00025590EC
Uncharacterized protein {ECO:0000313|EMBL:ENZ89331.1}; TaxID=1265309 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis F19
hypothetical protein
DolZOral124_scaffold_350_58
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62385..63779
-----------------
DNA (1395bp)
protein (465aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobac
Dihydrolipoyl dehydrogenase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EVS8_9RHOB rbh
pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase, putative
DolZOral124_scaffold_350_59
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63845..64207)
-----------------
DNA (363bp)
protein (121aa)
Rhodanese-like domain protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LRB0_RUEPO
Rhodanese domain-containing protein {ECO:0000313|EMBL:KFE34991.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thiocla
rhodanese-like domain protein
Displaying items 31-60 of 69 in total

View Taxonomy