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DolZOral124_scaffold_586

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_586_1
unknown

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1..78
-----------------
DNA (78bp)
protein (26aa)

This feature has no annotations

DolZOral124_scaffold_586_2
unknown

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comp(184..336)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

DolZOral124_scaffold_586_3
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(423..1814)
-----------------
DNA (1392bp)
protein (464aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Sensor histidine kinase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TU17_9RHOB rbh
sensor signal transduction histidine kinase
DolZOral124_scaffold_586_4
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1894..3318)
-----------------
DNA (1425bp)
protein (475aa)
lpdA1; dihydrolipoyl dehydrogenase LpdA (EC:1.8.1.4)
Mercuric reductase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRZ1_9RHOB rbh
Mercuric reductase {ECO:0000313|EMBL:EDM70957.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b
DolZOral124_scaffold_586_5
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3367..4086)
-----------------
DNA (720bp)
protein (240aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EFG8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA13640.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. CC
SNARE associated golgi protein-like protein
DolZOral124_scaffold_586_6
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4401..4535
-----------------
DNA (135bp)
protein (45aa)
50S ribosomal protein L34 n=7 Tax=Rhodobacteraceae RepID=RL34_RUEST
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sul
DolZOral124_scaffold_586_7
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4560..4982
-----------------
DNA (423bp)
protein (141aa)
ribonuclease P n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00036E5401
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
ribonuclease P
DolZOral124_scaffold_586_8
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4979..5224
-----------------
DNA (246bp)
protein (82aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=YIDD_RUEPO
putative protein TIGR00278
Putative membrane protein insertion efficiency factor {ECO:0000255|HAMAP-Rule:MF_00386}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeri
DolZOral124_scaffold_586_9
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5359..6456)
-----------------
DNA (1098bp)
protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DQW9_9RHOB rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyama
ychF; GTP-dependent nucleic acid-binding protein EngD
DolZOral124_scaffold_586_10
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6846..7637
-----------------
DNA (792bp)
protein (264aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1461693 species="
trpA; tryptophan synthase, alpha subunit (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=TRPA_RUEPO rbh
DolZOral124_scaffold_586_11
Shewanella piezotolerans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7682..8473
-----------------
DNA (792bp)
protein (264aa)
Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CQR3_SHEPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ30529.1}; TaxID=225849 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella piezotoler
DolZOral124_scaffold_586_12
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8700..9680
-----------------
DNA (981bp)
protein (327aa)
Extradiol ring-cleavage dioxygenase family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESD7_9RHOB rbh
3,4-dihydroxyphenylacetate 2,3-dioxygenase {ECO:0000313|EMBL:KIC10591.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source=
3,4-dihydroxyphenylacetate 2,3-dioxygenase
DolZOral124_scaffold_586_13
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9966..11102)
-----------------
DNA (1137bp)
protein (379aa)
Amidohydrolase 3 n=1 Tax=Ruegeria sp. R11 RepID=B7QVQ2_9RHOB rbh
Amidohydrolase 3 {ECO:0000313|EMBL:EEB69640.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. R11.;"
alkylphosphonate utilization protein PhnM, putative
DolZOral124_scaffold_586_14
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11111..11848)
-----------------
DNA (738bp)
protein (246aa)
Lipase, putative n=1 Tax=Roseovarius sp. 217 RepID=A3VYS8_9RHOB rbh
Acetyltransferase {ECO:0000313|EMBL:KJS42872.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41
lipase, putative
DolZOral124_scaffold_586_15
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11879..12379
-----------------
DNA (501bp)
protein (167aa)
Uncharacterized protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LJP5_DINSH
NUDIX hydrolase {ECO:0000313|EMBL:KGB83158.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
hypothetical protein
DolZOral124_scaffold_586_16
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12473..13504)
-----------------
DNA (1032bp)
protein (344aa)
MaoC family protein n=1 Tax=Citreicella sp. SE45 RepID=D0CZT0_9RHOB rbh
MaoC family dehydratase {ECO:0000313|EMBL:KEO53090.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
MaoC family dehydratase
DolZOral124_scaffold_586_17
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13506..13709)
-----------------
DNA (204bp)
protein (68aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F127C0
Uncharacterized protein {ECO:0000313|EMBL:KIC16986.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
DolZOral124_scaffold_586_18
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13714..14274)
-----------------
DNA (561bp)
protein (187aa)
membrane protein n=1 Tax=Loktanella vestfoldensis RepID=UPI0003622ADD
NnrU family protein {ECO:0000313|EMBL:EAQ06778.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensi
NnrU family protein
DolZOral124_scaffold_586_19
Rhodobacteraceae bacterium HIMB11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14301..15149)
-----------------
DNA (849bp)
protein (283aa)
Citrate lyase beta subunit n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V893_9RHOB rbh
Citrate lyase beta subunit {ECO:0000313|EMBL:ERL98926.1}; TaxID=1366046 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium
(3S)-malyl-CoA thioesterase
DolZOral124_scaffold_586_20
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15542..15859
-----------------
DNA (318bp)
protein (106aa)
Uncharacterized protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q169U7_ROSDO
Uncharacterized protein {ECO:0000313|EMBL:KIC51272.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. A
hypothetical protein
DolZOral124_scaffold_586_21
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15986..16813)
-----------------
DNA (828bp)
protein (276aa)
Putative uncharacterized protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CQ79_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEX08615.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter
hypothetical protein
DolZOral124_scaffold_586_22
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16895..17857
-----------------
DNA (963bp)
protein (321aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=644107 species="Bacteria; Pr
malate dehydrogenase (EC:1.1.1.37)
malate dehydrogenase n=1 Tax=Ruegeria conchae RepID=UPI000237B591 rbh
DolZOral124_scaffold_586_23

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comp(18133..18747)
-----------------
DNA (615bp)
protein (205aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00037DA955
Uncharacterized protein {ECO:0000313|EMBL:KKL75329.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
DolZOral124_scaffold_586_24
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19125..20318
-----------------
DNA (1194bp)
protein (398aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5) rbh
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Ruegeria sp. R11 RepID=B7QRN6_9RHOB rbh
DolZOral124_scaffold_586_25
unknown

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20322..20816
-----------------
DNA (495bp)
protein (165aa)

This feature has no annotations

DolZOral124_scaffold_586_26
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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20854..21735
-----------------
DNA (882bp)
protein (294aa)
sucD; succinyl-CoA ligase [ADP-forming] subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhod
Succinyl-CoA ligase [ADP-forming] subunit alpha n=2 Tax=Phaeobacter RepID=I7E9E8_PHAG2 rbh
DolZOral124_scaffold_586_27
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22095..25058
-----------------
DNA (2964bp)
protein (988aa)
2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:KIC51281.1}; EC=1.2.4.2 {ECO:0000313|EMBL:KIC51281.1};; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacte
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LJL3_DINSH rbh
DolZOral124_scaffold_586_28
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25062..26555
-----------------
DNA (1494bp)
protein (498aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoamide succinyltransferase n=1 Tax=Celeribacter baekdonensis B30 RepID=K2J1T7_9RHOB rbh
DolZOral124_scaffold_586_29
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26803..27078
-----------------
DNA (276bp)
protein (92aa)
Putative uncharacterized protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CQ87_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEX08623.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter
hypothetical protein
DolZOral124_scaffold_586_30
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27174..27554)
-----------------
DNA (381bp)
protein (127aa)
Tax=BJP_IG2102_Porphyrobacter_62_18
Displaying items 1-30 of 57 in total

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