ggKbase home page

DolZOral124_scaffold_617

Search features with annotation key words

Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_617_29
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31072..31674)
-----------------
DNA (603bp)
protein (201aa)
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae;
Recombination protein RecR id=2121041 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
recombination protein RecR
DolZOral124_scaffold_617_30
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31681..31980)
-----------------
DNA (300bp)
protein (100aa)
Nucleoid-associated protein UWK_03337 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PU44_DESSD
DNA-binding protein, YbaB/EbfC family
Nucleoid-associated protein UWK_03337 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" sour
DolZOral124_scaffold_617_31
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32031..33884)
-----------------
DNA (1854bp)
protein (618aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO33352.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
DNA polymerase III, subunits gamma and tau id=2121039 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DNA polymerase III subunits gamma and tau
DolZOral124_scaffold_617_trna_1
unknown

Not on your lists

comp(34216..34298)
-----------------
DNA (83bp)
transferRNA
DolZOral124_scaffold_617_32
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34389..34886)
-----------------
DNA (498bp)
protein (166aa)
tRNA-specific adenosine deaminase (EC:3.5.4.-)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacter
tRNA-specific adenosine deaminase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LYC0_SYNAS
DolZOral124_scaffold_617_33
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34951..36732)
-----------------
DNA (1782bp)
protein (594aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JAH9_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ09295.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
oligopeptidase
DolZOral124_scaffold_617_34
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36811..38427)
-----------------
DNA (1617bp)
protein (539aa)
fumarase (EC:4.2.1.2)
Fumarase n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THW8_CALNY rbh
Fumarate hydratase {ECO:0000313|EMBL:KIH76642.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter f
DolZOral124_scaffold_617_35
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38506..39639)
-----------------
DNA (1134bp)
protein (378aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase {ECO:0000313|EMBL:KGO33336.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus s
6-phosphofructokinase id=2072925 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_617_36
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40100..40972
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=GWB2_Desulfobacterales_56_26_curated
Ribosomal RNA small subunit methyltransferase I id=2121021 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolZOral124_scaffold_617_37

Not on your lists

40994..42628
-----------------
DNA (1635bp)
protein (545aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQ53_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD39281.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
DolZOral124_scaffold_617_38
Nautilia profundicola, Nautilia, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42652..43425)
-----------------
DNA (774bp)
protein (258aa)
Sulfate/molybdate ABC transporter, permease protein n=1 Tax=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) RepID=B9L5R7_NAUPA
sulfate/molybdate ABC transporter, permease protein
Sulfate/molybdate ABC transporter, permease protein {ECO:0000313|EMBL:ACM92549.1}; TaxID=598659 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Nautilia.;" source=
DolZOral124_scaffold_617_39
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43409..44416)
-----------------
DNA (1008bp)
protein (336aa)
sulfate/thiosulfate import ATP-binding protein CysA (EC:3.6.3.25)
ABC-type sulfate/molybdate transport system, ATPase component n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BLJ9_9HELI
ABC-type sulfate/molybdate transport system, ATPase component {ECO:0000313|EMBL:EHP28656.1}; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae
DolZOral124_scaffold_617_40
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44416..45366)
-----------------
DNA (951bp)
protein (317aa)
ABC-type molybdate transport system, periplasmic component n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BLJ8_9HELI
ABC-type molybdate transport system, periplasmic component {ECO:0000313|EMBL:EHP28655.1}; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; S
putative extracellular solute-binding protein
DolZOral124_scaffold_617_41
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45636..46547
-----------------
DNA (912bp)
protein (304aa)
ADP-ribosylglycohydrolase n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HSC8_9GAMM
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:ESP90809.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pse
ADP-ribosylation/Crystallin J1
DolZOral124_scaffold_617_42
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46582..47511)
-----------------
DNA (930bp)
protein (310aa)
Putative transporter of auxin efflux carrier family n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G6U4_9DELT
Putative transporter of auxin efflux carrier family {ECO:0000313|EMBL:EMS80311.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfot
putative transporter of auxin efflux carrier family
DolZOral124_scaffold_617_43
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47811..50105)
-----------------
DNA (2295bp)
protein (765aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IF03_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ08452.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
hypothetical protein
DolZOral124_scaffold_617_44
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50093..51052)
-----------------
DNA (960bp)
protein (320aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRM1_SYNAS
Uncharacterized protein {ECO:0000313|EMBL:KJS01090.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
nucleoside-diphosphate-sugar epimerase
DolZOral124_scaffold_617_45
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51184..53418)
-----------------
DNA (2235bp)
protein (745aa)
Pilus assembly protein {ECO:0000313|EMBL:KGO34408.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
Probable type IV pilus assembly protein (TapB) id=1882690 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
type IV-A pilus assembly ATPase PilB
DolZOral124_scaffold_617_46
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54262..56037
-----------------
DNA (1776bp)
protein (592aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000255|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000255|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000255|HAMAP-Rule:MF_01543}; Short=FHS {ECO:0
formate--tetrahydrofolate ligase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B5ACAB
DolZOral124_scaffold_617_47
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56194..56418)
-----------------
DNA (225bp)
protein (75aa)
ThiamineS protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RFS8_DESPD
thiamine protein
ThiamineS protein {ECO:0000313|EMBL:ADW18239.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propio
DolZOral124_scaffold_617_48
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56418..57605)
-----------------
DNA (1188bp)
protein (396aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase id=1734515 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Aldehyde:ferredoxin oxidoreductase {ECO:0000313|EMBL:KJR96432.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae
DolZOral124_scaffold_617_49
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57613..58068)
-----------------
DNA (456bp)
protein (152aa)
Aldehyde:ferredoxin oxidoreductase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PE03_DESSD
Aldehyde:ferredoxin oxidoreductase {ECO:0000313|EMBL:KGO34550.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="De
aldehyde:ferredoxin oxidoreductase
DolZOral124_scaffold_617_50
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58119..60038)
-----------------
DNA (1920bp)
protein (640aa)
Molybdopterin molybdochelatase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P394_DESSD
molybdopterin molybdochelatase
Molybdopterin molybdochelatase {ECO:0000313|EMBL:AGF77933.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfo
DolZOral124_scaffold_617_51
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60035..61306)
-----------------
DNA (1272bp)
protein (424aa)
Molybdopterin molybdochelatase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NE04_DESSD
Molybdenum cofactor biosynthesis protein (MoeA) {ECO:0000313|EMBL:KJR96463.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desu
molybdopterin molybdochelatase
DolZOral124_scaffold_617_52
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61299..61907)
-----------------
DNA (609bp)
protein (203aa)
Putative uncharacterized protein id=1734512 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
DolZOral124_scaffold_617_53
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62119..63750
-----------------
DNA (1632bp)
protein (544aa)
Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) {ECO:0000256|SAAS:SAAS00058367}; EC=5.4.2.12 {ECO:0000256|SAAS:SAAS00058367};; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteo
phosphoglycerate mutase (EC:5.4.2.1)
Phosphoglycerate mutase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P8A0_DESSD
DolZOral124_scaffold_617_54
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63752..64291
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7M2_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF79458.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa s
DolZOral124_scaffold_617_55
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64379..65122)
-----------------
DNA (744bp)
protein (248aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Des
GTP cyclohydrolase FolE2 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PCY0_DESSD rbh
hypothetical protein
DolZOral124_scaffold_617_56
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65362..65757
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J9U6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ12406.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
heat shock protein Hsp15
DolZOral124_scaffold_617_57
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65766..66383
-----------------
DNA (618bp)
protein (206aa)
Probable bifunctional purine biosynthesis protein (PurH) n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AMT2_DESPS
AICAR transformylase/IMP cyclohydrolase PurH Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
bifunctional purine biosynthesis protein (PurH)
Displaying items 31-60 of 65 in total

View Taxonomy