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DolZOral124_scaffold_643

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_643_1
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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1..1401
-----------------
DNA (1401bp)
protein (467aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E3Z4_9FIRM
DolZOral124_scaffold_643_2
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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1411..1968
-----------------
DNA (558bp)
protein (186aa)
Cell division protein ZapA n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CM44_9FIRM
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_643_3
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1974..4370
-----------------
DNA (2397bp)
protein (799aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1321814 species="Bacteria; Firm
Endonuclease MutS2 n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CQM5_9FIRM
MutS2 family protein
DolZOral124_scaffold_643_4
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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4373..6091
-----------------
DNA (1719bp)
protein (573aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=888727 species="Bacteria; Firm
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F3S6_9FIRM rbh
DolZOral124_scaffold_643_5
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6103..6975
-----------------
DNA (873bp)
protein (291aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FNI7_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:ETJ98953.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodat
hypothetical protein
DolZOral124_scaffold_643_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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7221..8189
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F2H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03594.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
TPR repeat-containing protein
DolZOral124_scaffold_643_7
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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8221..9762
-----------------
DNA (1542bp)
protein (514aa)
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJ18_9FIRM
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_643_8
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9768..10598
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9CZQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU77523.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-C
Putative Phosphatase.
DolZOral124_scaffold_643_9
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10623..11519)
-----------------
DNA (897bp)
protein (299aa)
Calcineurin-like phosphoesterase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VP23_CLOBI
putative phosphoesterase
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_643_10
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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11667..12944
-----------------
DNA (1278bp)
protein (426aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6ELS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA90957.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
hypothetical protein
DolZOral124_scaffold_643_11
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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12934..14520
-----------------
DNA (1587bp)
protein (529aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PKU1_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EUC78541.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATC
NAD(FAD)-utilizing dehydrogenase
DolZOral124_scaffold_643_12
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14520..16121
-----------------
DNA (1602bp)
protein (534aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PVP1_CLOSD
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CBH20608.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium
DolZOral124_scaffold_643_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

16169..19678
-----------------
DNA (3510bp)
protein (1170aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263005 species="Bacteria; F
addA; ATP-dependent helicase/deoxyribonuclease, subunit A (EC:3.6.1.-)
Recombination helicase AddA n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENQ4_9FIRM rbh
DolZOral124_scaffold_643_14
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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19703..20449
-----------------
DNA (747bp)
protein (249aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQY4_FILAD
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EFE29187.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor
DolZOral124_scaffold_643_15
unknown

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20556..20720
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

DolZOral124_scaffold_643_16
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20779..22212)
-----------------
DNA (1434bp)
protein (478aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLU6_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:EUC78377.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 3
DolZOral124_scaffold_643_17
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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22353..22901
-----------------
DNA (549bp)
protein (183aa)
acetyltransferase (EC:2.3.1.-)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLU5_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHO84533.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium
DolZOral124_scaffold_643_18
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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23097..23780
-----------------
DNA (684bp)
protein (228aa)
LexA repressor n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E783_9FIRM
transcriptional repressor, LexA family protein
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_643_19
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

23907..24464
-----------------
DNA (558bp)
protein (186aa)
Translation initiation factor IF-3 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6ER99_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium
translation initiation factor IF-3
DolZOral124_scaffold_643_20
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24497..24697
-----------------
DNA (201bp)
protein (67aa)
Ribosomal protein L35 n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1D4N4_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" sourc
50S ribosomal protein L35
DolZOral124_scaffold_643_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists


24715..25074
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L20 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENE8_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;
rplT; 50S ribosomal protein L20
DolZOral124_scaffold_643_22
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

25754..28597
-----------------
DNA (2844bp)
protein (948aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PZ35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29713.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
exported protein of unknown function
DolZOral124_scaffold_643_23
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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28887..29171
-----------------
DNA (285bp)
protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Coprococcus RepID=A8SV74_9FIRM
DolZOral124_scaffold_643_24
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29198..30664
-----------------
DNA (1467bp)
protein (489aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=126288
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PIW2_9FIRM
DolZOral124_scaffold_643_25
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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30666..33935
-----------------
DNA (3270bp)
protein (1090aa)
aspS3; Aspartate-tRNA ligase (EC:6.1.1.12)
Aspartyl-tRNA synthetase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I379_9CLOT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ETA80700.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
DolZOral124_scaffold_643_26
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34014..35129
-----------------
DNA (1116bp)
protein (372aa)
Trigger factor n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1D7B5_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium brachy ATCC 33089.;"
FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
DolZOral124_scaffold_643_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

35329..36738
-----------------
DNA (1410bp)
protein (470aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ESN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03653.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
DolZOral124_scaffold_643_28
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36894..37358
-----------------
DNA (465bp)
protein (155aa)
Transcriptional repressor NrdR n=1 Tax=Eubacterium infirmum F0142 RepID=H1PNC6_9FIRM
nrdR; transcriptional regulator NrdR
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_643_29
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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37374..38033
-----------------
DNA (660bp)
protein (220aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RSD7_9CLOT
DolZOral124_scaffold_643_30
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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38146..38823
-----------------
DNA (678bp)
protein (226aa)
UPF0758 protein Clos_1766 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=Y1766_ALKOO
radC; DNA repair protein RadC
UPF0758 protein Clos_1766; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandi
Displaying items 1-30 of 44 in total

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