ggKbase home page

DolZOral124_scaffold_646

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_646_1
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1..1239)
-----------------
DNA (1239bp)
protein (413aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI000365A8DF
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABG52341.1}; Flags: Precursor;; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatori
DolZOral124_scaffold_646_2
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1347..2384)
-----------------
DNA (1038bp)
protein (346aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002E58DA8
ABC transporter, periplasmic iron-compound-binding protein
Putative ABC transporter, periplasmic iron-compound-binding protein {ECO:0000313|EMBL:CAG21490.1}; TaxID=74109 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photob
DolZOral124_scaffold_646_3
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2847..3050)
-----------------
DNA (204bp)
protein (68aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus az
4-oxalocrotonate tautomerase family protein n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6DGQ2_BACAZ
4-oxalocrotonate tautomerase family enzyme
DolZOral124_scaffold_646_4
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3081..3620)
-----------------
DNA (540bp)
protein (180aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Kordia algicida OT-1 RepID=A9DYN5_9FLAO
XRE family transcriptional regulator {ECO:0000313|EMBL:KIX21869.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavo
methylated-DNA--protein-cysteine methyltransferase
DolZOral124_scaffold_646_5
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4251..4697
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein n=1 Tax=Neisseria shayeganii 871 RepID=G4CIP9_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:KJS29890.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatit
hypothetical protein
DolZOral124_scaffold_646_6
unknown

Not on your lists

comp(5083..5427)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

DolZOral124_scaffold_646_7
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6044..7519
-----------------
DNA (1476bp)
protein (492aa)
Putative sensor with HAMP domain n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMY0_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:KJS32895.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatit
sensor protein
DolZOral124_scaffold_646_8
unknown

Not on your lists

7551..8162
-----------------
DNA (612bp)
protein (204aa)

This feature has no annotations

DolZOral124_scaffold_646_9
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8159..9499
-----------------
DNA (1341bp)
protein (447aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMY2_SYNFM
Fis family transcriptional regulator {ECO:0000313|EMBL:KJS32897.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" sourc
two component sigma54 specific Fis family transcriptional regulator
DolZOral124_scaffold_646_10
Fusobacterium sp. CAG:649, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(9568..10647)
-----------------
DNA (1080bp)
protein (360aa)
Methionine-R-sulfoxide reductase n=2 Tax=Fusobacterium nucleatum RepID=G5GWG1_FUSNP
methionine-R-sulfoxide reductase
Methionine-S-sulfoxide reductase/methionine-R-sulfoxide reductase {ECO:0000313|EMBL:CDA07553.1}; TaxID=1262900 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; enviro
DolZOral124_scaffold_646_11
unknown

Not on your lists

10810..10974
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

DolZOral124_scaffold_646_12
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10931..11887
-----------------
DNA (957bp)
protein (319aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037F52CB
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:AFZ09846.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria n
DolZOral124_scaffold_646_13
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12190..12399)
-----------------
DNA (210bp)
protein (70aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI00037A25AB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR11982.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" so
DolZOral124_scaffold_646_14
unknown

Not on your lists

comp(12450..13022)
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

DolZOral124_scaffold_646_15
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13283..13747)
-----------------
DNA (465bp)
protein (155aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=GWB2_Desulfobacterales_56_26_curated
Ribosomal RNA large subunit methyltransferase H id=1882683 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolZOral124_scaffold_646_16
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13769..14146)
-----------------
DNA (378bp)
protein (126aa)
Putative Fe-S oxidoreductase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PJG3_DESSD
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AGF79705.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfoca
DolZOral124_scaffold_646_17
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14239..14808)
-----------------
DNA (570bp)
protein (190aa)
UPF0301 protein ACD_75C00442G0004 n=1 Tax=uncultured bacterium RepID=K1YQ73_9BACT
UPF0301 protein VR65_10370 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bact
hypothetical protein
DolZOral124_scaffold_646_18
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15242..16603)
-----------------
DNA (1362bp)
protein (454aa)
Putative low-complexity protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PT98_DESSD
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
putative low-complexity protein
DolZOral124_scaffold_646_19
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16634..17131)
-----------------
DNA (498bp)
protein (166aa)
Micrococcal nuclease-like nuclease n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PTD4_DESSD
Uncharacterized protein {ECO:0000313|EMBL:KJR96808.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
micrococcal nuclease-like nuclease
DolZOral124_scaffold_646_20
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17405..18931
-----------------
DNA (1527bp)
protein (509aa)
Related to two-component system response regulator (Ntr family) id=1701994 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator Tax=GWB2_Desulfobacterales_56_26_curated
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
DolZOral124_scaffold_646_21

Not on your lists

comp(18934..20655)
-----------------
DNA (1722bp)
protein (574aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YA04_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD34217.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
two-component system response regulator
DolZOral124_scaffold_646_22
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20714..21085)
-----------------
DNA (372bp)
protein (124aa)
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDC3_DESSD
Chemotaxis protein CheY {ECO:0000313|EMBL:KJR96296.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
DolZOral124_scaffold_646_23
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21355..23796
-----------------
DNA (2442bp)
protein (814aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YA72_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJR96297.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
hypothetical protein
DolZOral124_scaffold_646_24
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23823..24242
-----------------
DNA (420bp)
protein (140aa)
Flagellar basal body rod protein FlgB n=1 Tax=uncultured bacterium RepID=K1YA06_9BACT
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulba
flagellar basal-body rod protein FlgB
DolZOral124_scaffold_646_25

Not on your lists

24282..24722
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YNY6_9BACT
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
flagellar basal-body rod protein FlgC
DolZOral124_scaffold_646_26

Not on your lists

24752..25063
-----------------
DNA (312bp)
protein (104aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=uncultured bacterium RepID=K1Z8P9_9BACT
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
flagellar hook-basal body complex protein (FliE)
DolZOral124_scaffold_646_27

Not on your lists

25181..26839
-----------------
DNA (1659bp)
protein (553aa)
Flagellar M-ring protein n=1 Tax=uncultured bacterium RepID=K1ZSA2_9BACT
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF
DolZOral124_scaffold_646_28
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26846..27850
-----------------
DNA (1005bp)
protein (335aa)
Related to flagellar motor switch protein (FliG) id=1702004 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
flagellar motor switch protein FliG Tax=GWB2_Desulfobacterales_56_26_curated
flagellar motor switch protein (FliG)
DolZOral124_scaffold_646_29
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27837..28667
-----------------
DNA (831bp)
protein (277aa)
Related to flagellar assembly protein (FliH) id=1702005 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
flagellar biosynthesis/type III secretory pathway protein Tax=GWB2_Desulfobacterales_56_26_curated
flagellar assembly protein (FliH)
DolZOral124_scaffold_646_30
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28681..30036
-----------------
DNA (1356bp)
protein (452aa)
type III secretion system ATPase, FliI/YscN (EC:3.6.3.15) Tax=GWB2_Desulfobacterales_56_26_curated
type III secretion system ATPase, FliI/YscN (EC:3.6.3.15)
Probable flagellum-specific ATP synthase (FliI) id=1702030 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Displaying items 1-30 of 60 in total

View Taxonomy