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DolZOral124_scaffold_654

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_654_1
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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123..2738
-----------------
DNA (2616bp)
protein (872aa)
Protein translocase subunit SecA n=1 Tax=Clostridium sp. CAG:253 RepID=R6MV96_9CLOT
Preprotein translocase subunit SecA
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_654_2
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2695..3483
-----------------
DNA (789bp)
protein (263aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PJT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC18736.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
methyltransferase type 11
DolZOral124_scaffold_654_3
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

3476..4348
-----------------
DNA (873bp)
protein (291aa)
33 kDa chaperonin n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6R6Y9_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1263025 species="Bacteria; Firmicutes; enviro
Disulfide bond chaperones of the HSP33 family
DolZOral124_scaffold_654_4
unknown

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comp(4375..5280)
-----------------
DNA (906bp)
protein (302aa)

This feature has no annotations

DolZOral124_scaffold_654_5
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6077..6667)
-----------------
DNA (591bp)
protein (197aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
isopropylmalate isomerase n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00037022AE
leuD; isopropylmalate isomerase small subunit
DolZOral124_scaffold_654_6
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6677..8083)
-----------------
DNA (1407bp)
protein (469aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J461_9BACL rbh
3-isopropylmalate dehydratase large subunit
DolZOral124_scaffold_654_7
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8700..9968)
-----------------
DNA (1269bp)
protein (423aa)
cysD1; O-acetylhomoserine (thiol)-lyase CysD (EC:2.5.1.49)
O-acetylhomoserine (Thiol)-lyase CysD {ECO:0000313|EMBL:AFS77485.1}; EC=2.5.1.49 {ECO:0000313|EMBL:AFS77485.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;"
O-acetylhomoserine (Thiol)-lyase CysD n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXM0_CLOA9 rbh
DolZOral124_scaffold_654_8
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10080..12896)
-----------------
DNA (2817bp)
protein (939aa)
UvrABC system protein A n=3 Tax=Lachnospiraceae RepID=E9RW41_9FIRM
excinuclease ABC, A subunit
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_654_9
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12897..14882)
-----------------
DNA (1986bp)
protein (662aa)
UvrABC system protein B n=1 Tax=Coprococcus catus GD/7 RepID=D4J3W3_9FIRM
excinuclease ABC, B subunit
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_654_10
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15024..15308)
-----------------
DNA (285bp)
protein (95aa)
Putative septation protein SpoVG n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K7X5_CLOPA
spoVG; regulatory protein SpoVG
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianu
DolZOral124_scaffold_654_11
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15394..15957)
-----------------
DNA (564bp)
protein (188aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAM
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y2F8_9FIRM
DolZOral124_scaffold_654_12
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16033..17112)
-----------------
DNA (1080bp)
protein (360aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VML1_CLOSH
hypothetical protein
Zinc finger domain protein, LSD1 subclass {ECO:0000313|EMBL:AGC67889.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridi
DolZOral124_scaffold_654_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17185..18366)
-----------------
DNA (1182bp)
protein (394aa)
Antifreeze protein n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DN28_9BACL
Double zinc ribbon family protein {ECO:0000313|EMBL:KIE45844.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense
virion core protein
DolZOral124_scaffold_654_14
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

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comp(18454..20073)
-----------------
DNA (1620bp)
protein (540aa)
Trehalose-6-P hydrolase protein {ECO:0000313|EMBL:ERJ13059.1}; EC=3.2.1.10 {ECO:0000313|EMBL:ERJ13059.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Hal
malL_1; Oligo-1,6-glucosidase (EC:3.2.1.10)
Trehalose-6-P hydrolase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FPU3_9BACT rbh
DolZOral124_scaffold_654_15
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20440..25752)
-----------------
DNA (5313bp)
protein (1771aa)
Glucoamylase-like protein n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8DIG9_THETY rbh
Glucoamylase-like protein {ECO:0000313|EMBL:EMT39862.1}; TaxID=1198630 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoa
carbohydrate-binding family 6 protein
DolZOral124_scaffold_654_16
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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comp(25784..27484)
-----------------
DNA (1701bp)
protein (567aa)
Uncharacterized protein id=4193891 bin=GWC2_Clostridiales_40_7 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
hypothetical protein Tax=GWC2_Clostridiales_40_7_curated
hypothetical protein
DolZOral124_scaffold_654_17
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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comp(27499..28332)
-----------------
DNA (834bp)
protein (278aa)
ABC-type transporter, integral membrane subunit id=4193893 bin=GWC2_Clostridiales_40_7 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
ABC transporter Tax=GWC2_Clostridiales_40_7_curated
ABC transporter
DolZOral124_scaffold_654_18
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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comp(28342..29250)
-----------------
DNA (909bp)
protein (303aa)
Binding-protein-dependent transport systems inner membrane component id=4193895 bin=GWC2_Clostridiales_40_7 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein Tax=GWC2_Clostridiales_40_7_curated
binding-protein-dependent transport systems inner membrane component
DolZOral124_scaffold_654_19
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(29327..30661)
-----------------
DNA (1335bp)
protein (445aa)
Extracellular solute-binding protein family 1 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MR30_9FIRM rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDB88292.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
extracellular solute-binding protein
DolZOral124_scaffold_654_20
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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30845..31747
-----------------
DNA (903bp)
protein (301aa)
AraC family transcriptional regulator id=4581172 bin=GWC2_Clostridiales_40_7 species=Clostridium arbusti genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
DNA-binding domain-containing protein, AraC-type Tax=GWC2_Clostridiales_40_7_curated
DNA-binding domain-containing protein, AraC-type
DolZOral124_scaffold_654_21
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31839..33506)
-----------------
DNA (1668bp)
protein (556aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EBE3_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHV97051.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
DolZOral124_scaffold_654_22
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(33509..34330)
-----------------
DNA (822bp)
protein (274aa)
ABC-type sugar transport system, permease component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QUM0_SPHPG
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AJY75434.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
DolZOral124_scaffold_654_23
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34343..35134)
-----------------
DNA (792bp)
protein (264aa)
permease component of ABC-type sugar transporter
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AHV97049.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacill
Putative uncharacterized protein id=4205698 bin=GWC2_Clostridiales_40_7 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
DolZOral124_scaffold_654_24
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35303..35707)
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKG34461.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
Putative uncharacterized protein id=4205700 bin=GWC2_Clostridiales_40_7 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
DolZOral124_scaffold_654_25
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35662..36678)
-----------------
DNA (1017bp)
protein (339aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY75433.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
Putative uncharacterized protein id=4205700 bin=GWC2_Clostridiales_40_7 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
DolZOral124_scaffold_654_26
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36877..38655
-----------------
DNA (1779bp)
protein (593aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N6N2_9CLOT rbh
sensor with HAMP domain
Sensor with HAMP domain {ECO:0000313|EMBL:AHV97047.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
DolZOral124_scaffold_654_27
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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38667..40196
-----------------
DNA (1530bp)
protein (510aa)
Response regulator receiver domain protein id=4205706 bin=GWC2_Clostridiales_40_7 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AHV97046.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae
DolZOral124_scaffold_654_28
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40205..41416)
-----------------
DNA (1212bp)
protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4MPC7_CLOTM rbh
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_654_29
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(41418..42725)
-----------------
DNA (1308bp)
protein (436aa)
Efflux transporter, RND family, MFP subunit n=7 Tax=Clostridium thermocellum RepID=A3DGA4_CLOTH
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABN52983.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostrid
DolZOral124_scaffold_654_30
unknown

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comp(42727..43548)
-----------------
DNA (822bp)
protein (274aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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