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DolZOral124_scaffold_752

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_752_1
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..142
-----------------
DNA (141bp)
protein (47aa)
50S ribosomal protein L19 n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MM49_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospi
ribosomal protein L19, bacterial type
DolZOral124_scaffold_752_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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419..976
-----------------
DNA (558bp)
protein (186aa)
Elongation factor P n=2 Tax=Ruminococcus lactaris RepID=B5CSL7_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococ
translation elongation factor P (EF-P)
DolZOral124_scaffold_752_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1083..2237
-----------------
DNA (1155bp)
protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z5W6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ93139.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
permease
DolZOral124_scaffold_752_4
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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2265..5816
-----------------
DNA (3552bp)
protein (1184aa)
Transcription-repair-coupling factor n=3 Tax=Anaerostipes RepID=B0MFR4_9FIRM
transcription-repair coupling factor
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_752_5
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6052..6327
-----------------
DNA (276bp)
protein (92aa)
DNA-binding protein HU-beta n=1 Tax=Eubacterium sp. CAG:248 RepID=R6K9C4_9FIRM
DNA-binding protein HU-beta {ECO:0000313|EMBL:CDB66621.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacte
histone family protein DNA-binding protein
DolZOral124_scaffold_752_6
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6405..6644
-----------------
DNA (240bp)
protein (80aa)
S4 domain protein n=2 Tax=Clostridium RepID=A7VGT4_9CLOT
S4 domain protein {ECO:0000313|EMBL:EDO57321.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
DolZOral124_scaffold_752_7
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6653..6943
-----------------
DNA (291bp)
protein (97aa)
Putative cell division protein FtsL n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VY22_9FIRM
Putative cell division protein FtsL {ECO:0000313|EMBL:CCZ92699.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source
DolZOral124_scaffold_752_8
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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6945..8324
-----------------
DNA (1380bp)
protein (460aa)
tRNA(Ile)-lysidine synthase n=2 Tax=Clostridium carboxidivorans P7 RepID=D6MD35_9CLOT
tRNA(Ile)-lysidine synthetase
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_752_9
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8317..8841
-----------------
DNA (525bp)
protein (175aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CBK79911.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CBK79911.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae;
Hypoxanthine phosphoribosyltransferase n=1 Tax=Coprococcus catus GD/7 RepID=D4J6E0_9FIRM
DolZOral124_scaffold_752_10
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8999..10264
-----------------
DNA (1266bp)
protein (422aa)
hypothetical protein n=1 Tax=Streptococcus ovis RepID=UPI0003694702
Membrane protein {ECO:0000313|EMBL:KEZ86837.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
YeeE/YedE family integral membrane protein
DolZOral124_scaffold_752_11
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10357..11205)
-----------------
DNA (849bp)
protein (283aa)
Permeases of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP54_CLOSA
transporter
Transporter {ECO:0000313|EMBL:AHM56056.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
DolZOral124_scaffold_752_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11494..11985
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36614.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
Predicted metal-binding, possibly nucleic acid-binding protein
DolZOral124_scaffold_752_13
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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11988..12164
-----------------
DNA (177bp)
protein (59aa)
50S ribosomal protein L32 n=2 Tax=Lachnospiraceae RepID=F7JQ81_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae b
ribosomal protein L32
DolZOral124_scaffold_752_14
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12289..13173
-----------------
DNA (885bp)
protein (295aa)
TIGR00255 family protein n=5 Tax=Clostridiales RepID=A5KQ52_9FIRM
YicC protein {ECO:0000313|EMBL:EFV20264.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
DolZOral124_scaffold_752_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13183..13815
-----------------
DNA (633bp)
protein (211aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA73_9CLOT
DolZOral124_scaffold_752_16
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13817..14053
-----------------
DNA (237bp)
protein (79aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AQQ6_EUBCE
DolZOral124_scaffold_752_17
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14075..16318
-----------------
DNA (2244bp)
protein (748aa)
replication restart DNA helicase PriA (EC:3.6.1.-)
Replication restart DNA helicase PriA n=2 Tax=Clostridiales RepID=D4MV89_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_752_18
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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16320..16787
-----------------
DNA (468bp)
protein (156aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def1; polypeptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y3L5_9FIRM
DolZOral124_scaffold_752_19
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16778..17722
-----------------
DNA (945bp)
protein (315aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263051 species="
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Bacteroides pectinophilus CAG:437 RepID=R7AE18_9BACE rbh
DolZOral124_scaffold_752_20
Caldithrix abyssi, Caldithrix, Bacteria

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17779..18495
-----------------
DNA (717bp)
protein (239aa)
Peptidase membrane zinc metallopeptidase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYX5_9BACT
Peptidase membrane zinc metallopeptidase {ECO:0000313|EMBL:EHO42046.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
peptidase, membrane zinc metallopeptidase
DolZOral124_scaffold_752_21
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18480..19802
-----------------
DNA (1323bp)
protein (441aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium sp. CAG:122 RepID=R5RN26_9CLOT rbh
sun protein
DolZOral124_scaffold_752_22
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19802..20857
-----------------
DNA (1056bp)
protein (352aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAU2_9FIRM
ribosomal RNA large subunit methyltransferase N
DolZOral124_scaffold_752_23
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21227..23461
-----------------
DNA (2235bp)
protein (745aa)
Formate acetyltransferase {ECO:0000313|EMBL:EDX70975.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDX70975.1};; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofascicu
formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W4D2_9CYAN rbh
DolZOral124_scaffold_752_24
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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23963..24700
-----------------
DNA (738bp)
protein (246aa)
pyruvate formate lyase-activating protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFF59
pyruvate formate-lyase activating enzyme
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_752_25
unknown

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24861..25133
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

DolZOral124_scaffold_752_26
unknown

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25156..25467
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

DolZOral124_scaffold_752_27
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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25571..26983
-----------------
DNA (1413bp)
protein (471aa)
Probable cytosol aminopeptidase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CM58_9FIRM
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1321778 spec
leucyl aminopeptidase
DolZOral124_scaffold_752_28
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27068..28114)
-----------------
DNA (1047bp)
protein (349aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77950.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
DolZOral124_scaffold_752_29
unknown

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28404..29366
-----------------
DNA (963bp)
protein (321aa)

This feature has no annotations

DolZOral124_scaffold_752_30
Listeria grayi, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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29449..30276
-----------------
DNA (828bp)
protein (276aa)
Sugar transport protein n=1 Tax=Listeria grayi DSM 20601 RepID=D7UUN8_LISGR
Sugar transport protein {ECO:0000313|EMBL:EFI84964.1}; TaxID=525367 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria grayi DSM 20601.;"
sugar transport family protein
Displaying items 1-30 of 49 in total

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