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DolZOral124_scaffold_792

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_792_1
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1971
-----------------
DNA (1971bp)
protein (657aa)
UvrABC system protein B n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1DD89_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
DolZOral124_scaffold_792_2
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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2054..4945
-----------------
DNA (2892bp)
protein (964aa)
UvrABC system protein A n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ET23_9FIRM
uvrA; UvrABC system protein A
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_792_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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5199..6629
-----------------
DNA (1431bp)
protein (477aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1263005 species=
Nicotinate phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0Y7_9FIRM
putative nicotinate phosphoribosyltransferase
DolZOral124_scaffold_792_4
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6641..7570
-----------------
DNA (930bp)
protein (310aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Eubacterium infirmum F0142 RepID=H1PJP4_9FIRM rbh
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EHO86743.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="
DolZOral124_scaffold_792_5
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7773..8852
-----------------
DNA (1080bp)
protein (360aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostr
Polyamine ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CUP5_9CLOT
potA; spermidine/putrescine transport ATP-binding protein potA
DolZOral124_scaffold_792_6
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8842..9654
-----------------
DNA (813bp)
protein (271aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F0I7_CLOS4 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDA61856.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
potB; spermidine/putrescine transport ATP-binding protein PotA
DolZOral124_scaffold_792_7
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9651..11726
-----------------
DNA (2076bp)
protein (692aa)
CINTURNW_nithine carbamoyltransferase n=1 Tax=Clostridium intestinale URNW RepID=U2PWQ0_9CLOT rbh
CINTURNW_nithine carbamoyltransferase {ECO:0000313|EMBL:ERK30890.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestin
Spermidine/putrescine-binding periplasmic protein
DolZOral124_scaffold_792_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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11906..14638
-----------------
DNA (2733bp)
protein (911aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1Q4_9FIRM
valyl-tRNA synthetase
DolZOral124_scaffold_792_9
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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14676..15977
-----------------
DNA (1302bp)
protein (434aa)
Bifunctional protein FolC {ECO:0000313|EMBL:ETJ99240.1}; EC=6.3.2.- {ECO:0000313|EMBL:ETJ99240.1};; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. I
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EL13_9FIRM rbh
DolZOral124_scaffold_792_10
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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15953..16855
-----------------
DNA (903bp)
protein (301aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLE5_9FIRM
Putative lipid kinase {ECO:0000313|EMBL:EUC78546.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC
Transcription regulator
DolZOral124_scaffold_792_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16856..17965
-----------------
DNA (1110bp)
protein (370aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
tRNA-specific 2-thiouridylase MnmA n=180 Tax=Clostridium difficile RepID=MNMA_CLOD6
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
DolZOral124_scaffold_792_trna_1
unknown

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18019..18092
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_792_12
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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18205..19257
-----------------
DNA (1053bp)
protein (351aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NIB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF09411.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacter
hypothetical protein
DolZOral124_scaffold_792_13
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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19321..19980
-----------------
DNA (660bp)
protein (220aa)
Phosphatidylserine synthase (EC:2.7.8.8)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PMF0_9FIRM
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:KGF09410.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;"
DolZOral124_scaffold_792_14
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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20041..20916
-----------------
DNA (876bp)
protein (292aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DLM7_9FIRM
DolZOral124_scaffold_792_15
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20941..21963
-----------------
DNA (1023bp)
protein (341aa)
rluC1; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24)
Pseudouridine synthase, RluA family n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1D4N8_9FIRM
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:ESE28599.1}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium brachy ATC
DolZOral124_scaffold_792_16
Mogibacterium timidum, Mogibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21989..22552
-----------------
DNA (564bp)
protein (188aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1401079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. In
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Mogibacterium sp. CM50 RepID=J6HHG5_9FIRM
DolZOral124_scaffold_792_17
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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22588..23049
-----------------
DNA (462bp)
protein (154aa)
SsrA-binding protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PJP8_9FIRM
smpB; SsrA-binding protein
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_792_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

23789..27490
-----------------
DNA (3702bp)
protein (1234aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZN9_9FIRM
DolZOral124_scaffold_792_19
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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27496..31173
-----------------
DNA (3678bp)
protein (1226aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E4F3_9FIRM
DNA-directed RNA polymerase subunit beta'
DolZOral124_scaffold_792_20
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

Not on your lists

31298..32362
-----------------
DNA (1065bp)
protein (355aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
membrane protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2C7C0
kwg repeat protein Tax=GWD2_Clostridiales_32_19_curated
DolZOral124_scaffold_792_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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32455..34110
-----------------
DNA (1656bp)
protein (552aa)
ribonuclease (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ESS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03698.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
DolZOral124_scaffold_792_22
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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34150..35193
-----------------
DNA (1044bp)
protein (348aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PMY2_9FIRM
PTS system transporter subunit IIC
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_792_23
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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35301..35930
-----------------
DNA (630bp)
protein (210aa)
Adenylate cyclase n=1 Tax=Eubacterium infirmum F0142 RepID=H1PNE7_9FIRM
CHAD domain containing protein
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_792_24
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

36103..37386
-----------------
DNA (1284bp)
protein (428aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EJY9_9FIRM
tig; trigger factor
DolZOral124_scaffold_792_25
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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37404..37985
-----------------
DNA (582bp)
protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
clpP1; ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DP37_9FIRM
DolZOral124_scaffold_792_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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38002..39279
-----------------
DNA (1278bp)
protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EUR9_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firm
clpX; ATP-dependent protease ATP-binding subunit ClpX
DolZOral124_scaffold_792_27
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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39332..41812
-----------------
DNA (2481bp)
protein (827aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E124_9FIRM
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_792_28
Mogibacterium sp. CM50, Mogibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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41889..42476
-----------------
DNA (588bp)
protein (196aa)
Probable GTP-binding protein EngB n=1 Tax=Mogibacterium sp. CM50 RepID=J5WB66_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=936375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. In
engB; ribosome biogenesis GTP-binding protein YsxC
DolZOral124_scaffold_792_29
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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42488..42835
-----------------
DNA (348bp)
protein (116aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ESR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03683.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Displaying items 1-30 of 38 in total

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