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DolZOral124_scaffold_820

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_820_1
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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41..649
-----------------
DNA (609bp)
protein (203aa)
30S ribosomal protein S4 id=4861367 bin=GWA2_Bacteroidetes_40_14 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good rbh
rpsD; 30S ribosomal protein S4
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_2
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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656..1648
-----------------
DNA (993bp)
protein (331aa)
DNA-directed RNA polymerase subunit alpha id=1851798 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 rbh
DNA-directed RNA polymerase subunit alpha
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_3
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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1655..2281
-----------------
DNA (627bp)
protein (209aa)
50S ribosomal protein L17 id=4124782 bin=GWF2_Bacteroidetes_40_13 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
50S ribosomal protein L17
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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2427..4880
-----------------
DNA (2454bp)
protein (818aa)
AMP-forming long-chain acyl-CoA synthetase id=4058558 bin=GWC2_Bacteroidetes_40_13 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
AMP-forming long-chain acyl-CoA synthetase Tax=GWE2_Bacteroidetes_40_63_curated
AMP-forming long-chain acyl-CoA synthetase
DolZOral124_scaffold_820_5
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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4960..5313
-----------------
DNA (354bp)
protein (118aa)
30S ribosomal protein S6 id=4438203 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
30S ribosomal protein S6
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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5317..5586
-----------------
DNA (270bp)
protein (90aa)
30S ribosomal protein S18 id=3371499 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=GWE2_Bacteroidetes_40_63_curated
30S ribosomal protein S18
DolZOral124_scaffold_820_7
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists


5602..6048
-----------------
DNA (447bp)
protein (149aa)
50S ribosomal protein L9 id=2147144 bin=GWE2_Bacteroidetes_40_63 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
rplI; 50S ribosomal protein L9
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6104..9349)
-----------------
DNA (3246bp)
protein (1082aa)
Uncharacterized protein id=1832711 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 rbh
ATP-dependent helicase Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
DolZOral124_scaffold_820_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9362..10390)
-----------------
DNA (1029bp)
protein (343aa)
DNA polymerase III, delta subunit id=1832716 bin=GWD2_Bacteroidetes_40_43 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 rbh
DNA polymerase III subunit delta Tax=GWE2_Bacteroidetes_40_63_curated
DNA polymerase III subunit delta
DolZOral124_scaffold_820_10
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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10725..17996
-----------------
DNA (7272bp)
protein (2424aa)
PKD domain containing protein id=3649553 bin=GWF2_Bacteroidetes_40_13 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_11
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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18090..19079
-----------------
DNA (990bp)
protein (330aa)
membrane protein id=2041345 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 rbh
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_12
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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19090..19878
-----------------
DNA (789bp)
protein (263aa)
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=GWF2_Bacteroidetes_33_38_curated
tRNA pseudouridine synthase A id=4263546 bin=GWF2_Bacteroidetes_33_38 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
tRNA pseudouridine synthase A
DolZOral124_scaffold_820_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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19951..20427
-----------------
DNA (477bp)
protein (159aa)
Thioredoxin id=4961271 bin=GWC2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
thioredoxin Tax=GWE2_Bacteroidetes_40_63_curated
thioredoxin
DolZOral124_scaffold_820_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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20656..23382
-----------------
DNA (2727bp)
protein (909aa)
histidine kinase hamp region domain protein id=3890732 bin=GWF2_Bacteroidetes_40_13 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
pas sensor protein Tax=GWE2_Bacteroidetes_40_63_curated
pas/pac sensor protein
DolZOral124_scaffold_820_15
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists


23489..23800
-----------------
DNA (312bp)
protein (104aa)
50S ribosomal protein L21 id=1917978 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
50S ribosomal protein L21
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_16
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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23823..24080
-----------------
DNA (258bp)
protein (86aa)
50S ribosomal protein L27 n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P2I6_WEEVC
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (
DolZOral124_scaffold_820_17
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24271..25548
-----------------
DNA (1278bp)
protein (426aa)
seryl-tRNA synthetase
Seryl-tRNA synthetase {ECO:0000313|EMBL:AHW59957.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orient
Seryl-tRNA synthetase id=1917972 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 rbh
DolZOral124_scaffold_820_18
unknown

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25562..25783
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

DolZOral124_scaffold_820_19
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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25762..26037
-----------------
DNA (276bp)
protein (92aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FNE7_FLAJ1
Addiction module toxin YoeB {ECO:0000313|EMBL:KIA99322.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium
addiction module antitoxin
DolZOral124_scaffold_820_20
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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26108..26662
-----------------
DNA (555bp)
protein (185aa)
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Holliday junction resolvase id=4640843 bin=GWA2_Bacteroidetes_40_14 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26717..27352
-----------------
DNA (636bp)
protein (212aa)
beta-lactamase domain-containing protein id=4151164 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
metallO-beta-lactamase Tax=GWE2_Bacteroidetes_40_63_curated
beta-lactamase domain-containing protein
DolZOral124_scaffold_820_22
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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27522..28829
-----------------
DNA (1308bp)
protein (436aa)
Putative uncharacterized protein id=1983988 bin=GWE2_Bacteroidetes_29_8 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good rbh
outer membrane efflux protein
Tax=BJP_IG2103_Bacteroidetes_41_9
DolZOral124_scaffold_820_23
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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29033..30079
-----------------
DNA (1047bp)
protein (349aa)
Efflux transporter RND family MFP subunit n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P7L2_9PORP rbh
efflux transporter, RND family, MFP subunit
Tax=BJP_IG2103_Bacteroidetes_41_9
DolZOral124_scaffold_820_24
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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30147..33266
-----------------
DNA (3120bp)
protein (1040aa)
multidrug transporter AcrB n=1 Tax=Butyricimonas synergistica RepID=UPI000377D2C3 rbh
acriflavin resistance protein
Tax=BJP_IG2103_Bacteroidetes_41_9
DolZOral124_scaffold_820_25
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

33332..33625
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:831 RepID=R5IDE0_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
DolZOral124_scaffold_820_26
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(33650..34879)
-----------------
DNA (1230bp)
protein (410aa)
protein serine/threonine phosphatase id=2590091 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
protein serine/threonine phosphatase; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) Tax=GWF2_Bacteroidetes_33_38_curated
Ser/Thr phosphatase
DolZOral124_scaffold_820_27
unknown

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comp(35526..35960)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

DolZOral124_scaffold_820_28
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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comp(36086..36652)
-----------------
DNA (567bp)
protein (189aa)
Elongation factor P id=4365568 bin=GWC2_Bacteroidetes_40_13 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
translation elongation factor p (ef-p)
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_820_trna_1
unknown

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comp(36711..36784)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_820_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(36836..37441)
-----------------
DNA (606bp)
protein (202aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 id=4345673 bin=GWC2_Bacteroidetes_40_13 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
had-superfamily hydrolase, subfamily ia, variant 3; K07025 putative hydrolase of the HAD superfamily Tax=GWE2_Bacteroidetes_40_63_curated
haloacid dehalogenase
Displaying items 1-30 of 37 in total

View Taxonomy