ggKbase home page

DolZOral124_scaffold_826

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_826_1
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(1610..3622)
-----------------
DNA (2013bp)
protein (671aa)
Family 3 adenylate cyclase id=1808416 bin=GWE2_Bacteroidetes_29_8 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
family 3 adenylate cyclase Tax=GWE2_Bacteroidetes_29_8_curated
family 3 adenylate cyclase
DolZOral124_scaffold_826_2
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

Not on your lists

comp(3609..4445)
-----------------
DNA (837bp)
protein (279aa)
Beta-lactamase-like protein id=2047603 bin=GWD2_Clostridiales_32_59 species=Crocosphaera watsonii genus=Crocosphaera taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
beta-lactamase-like protein Tax=GWD2_Clostridiales_32_59_curated
beta-lactamase-like protein
DolZOral124_scaffold_826_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(4472..6112)
-----------------
DNA (1641bp)
protein (547aa)
Metal dependent phosphohydrolase id=3858826 bin=GWB1_CP_36_13 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
metal dependent phosphohydrolase Tax=GWB1_Spirochaetes_36_13_curated
hypothetical protein
DolZOral124_scaffold_826_4
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6269..6970
-----------------
DNA (702bp)
protein (234aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9X187_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14545.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
redoxin domain protein
DolZOral124_scaffold_826_5
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7063..8244)
-----------------
DNA (1182bp)
protein (394aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine/D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZZ06_9BACT
DolZOral124_scaffold_826_6
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8255..9919)
-----------------
DNA (1665bp)
protein (555aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillale
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6U1T3_BACCJ
Mur ligase middle domain-containing protein
DolZOral124_scaffold_826_7
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9923..10693)
-----------------
DNA (771bp)
protein (257aa)
Hydrolase, alpha/beta fold family, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZSA2_9BACT
Hydrolase, alpha/beta fold family, putative {ECO:0000313|EMBL:EAY26825.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla ma
alpha/beta hydrolase
DolZOral124_scaffold_826_8
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10949..12895
-----------------
DNA (1947bp)
protein (649aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AYW6_9CLOT
hypothetical protein
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EOD01897.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter
DolZOral124_scaffold_826_9
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12947..13945
-----------------
DNA (999bp)
protein (333aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pe
prsA1; foldase protein PrsA (EC:5.2.1.8)
Foldase protein PrsA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDH7_9CLOT
DolZOral124_scaffold_826_10
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14019..15626
-----------------
DNA (1608bp)
protein (536aa)
Polysaccharide biosynthesis protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJN2_ALKMQ rbh
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ABR46400.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metallire
DolZOral124_scaffold_826_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15641..17098
-----------------
DNA (1458bp)
protein (486aa)
Protein containing tetrapyrrole methyltransferase n=1 Tax=Bacillus megaterium WSH-002 RepID=G2RS61_BACME rbh
mazG; protein containing tetrapyrrole methyltransferase
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:KGG80636.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter az
DolZOral124_scaffold_826_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17269..17547
-----------------
DNA (279bp)
protein (93aa)
DNA-binding protein HBsu n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUK3_9CLOT
DNA-binding protein {ECO:0000313|EMBL:KGG80635.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H532
hup; DNA-binding protein HU
DolZOral124_scaffold_826_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17625..17864
-----------------
DNA (240bp)
protein (80aa)
Ribosome-associated heat shock protein implicated in recycling of 50S subunit n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TTU3_9CLOT
Ribosome-associated heat shock protein implicated in recycling of 50S subunit {ECO:0000313|EMBL:EKQ55975.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
ribosome-associated heat shock protein implicated in recycling of 50S subunit
DolZOral124_scaffold_826_14
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17929..18225
-----------------
DNA (297bp)
protein (99aa)
Putative septum formation initiator family protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1L7_CLOA9
septum formation initiator family protein
Putative septum formation initiator family protein {ECO:0000313|EMBL:AFS79369.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici
DolZOral124_scaffold_826_15
Staphylococcus caprae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18259..18675
-----------------
DNA (417bp)
protein (139aa)
RNA-binding protein n=1 Tax=Bavariicoccus seileri RepID=UPI0003B51BFD
S1 RNA binding domain protein {ECO:0000313|EMBL:EES42212.1}; TaxID=525378 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus caprae M23864:W1.;"
polyribonucleotide nucleotidyltransferase
DolZOral124_scaffold_826_16
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18659..19621
-----------------
DNA (963bp)
protein (321aa)
Ppx/GppA phosphatase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MK29_ALKOO
Ppx/GppA phosphatase
Ppx/GppA phosphatase {ECO:0000313|EMBL:ABW20161.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILA
DolZOral124_scaffold_826_trna_1
unknown

Not on your lists

19676..19749
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_826_trna_2
unknown

Not on your lists

19756..19828
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_826_17
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19840..21213
-----------------
DNA (1374bp)
protein (458aa)
tilS; tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1K9_CLOA9
DolZOral124_scaffold_826_18
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21275..23437
-----------------
DNA (2163bp)
protein (721aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Cl
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLS7_ALKOO rbh
ATP-dependent metalloprotease FtsH
DolZOral124_scaffold_826_19
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23515..23904
-----------------
DNA (390bp)
protein (130aa)
Thioesterase family protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWY2_9CLOT
Thioesterase family protein {ECO:0000313|EMBL:EOD01134.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiriti
thioesterase family protein
DolZOral124_scaffold_826_20
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23926..24768
-----------------
DNA (843bp)
protein (281aa)
Fumarate hydratase class I, aerobic L(+)-tartrate dehydratase alpha subunit {ECO:0000313|EMBL:CDF59428.1}; EC=4.2.1.2 {ECO:0000313|EMBL:CDF59428.1};; EC=4.2.1.32 {ECO:0000313|EMBL:CDF59428.1};; TaxID=
hydro-lyase, Fe-S type, tartrate/fumarate subfamily (EC:4.2.1.2)
fumarate hydratase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E7CA
DolZOral124_scaffold_826_21
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24771..25325
-----------------
DNA (555bp)
protein (185aa)
Putative fumarate hydratase subunit beta {ECO:0000313|EMBL:KDR94551.1}; EC=4.2.1.2 {ECO:0000313|EMBL:KDR94551.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoc
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LVC0_TEPAE
DolZOral124_scaffold_826_22
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25985..27157
-----------------
DNA (1173bp)
protein (391aa)
ytsJ; NAD-dependent malic enzyme 4 (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3DED1_CLODI rbh
Malic enzyme {ECO:0000313|EMBL:KDR94550.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;
DolZOral124_scaffold_826_23
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

27331..28878
-----------------
DNA (1548bp)
protein (516aa)
methylmalonyl-CoA carboxyltransferase n=1 Tax=[Clostridium] glycolicum RepID=UPI0003663F15
yqjD; carboxyl transferase yqjd Tax=GWB2_Clostridiales_37_7_curated
yqjD; Carboxyl transferase YqjD
DolZOral124_scaffold_826_24
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

28891..29316
-----------------
DNA (426bp)
protein (142aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; Flags: Precursor;; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; F
Oxaloacetate decarboxylase gamma chain n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HCT5_ILYPC
sodium pump decarboxylase, gamma subunit
DolZOral124_scaffold_826_25
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

29325..29741
-----------------
DNA (417bp)
protein (139aa)
gcdC; Glutaconyl-CoA decarboxylase subunit gamma (Biotin carrier) (EC:4.1.1.70)
Biotin/lipoyl attachment protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CR27_9CLOT
Biotin-requiring enzyme {ECO:0000313|EMBL:KHO62758.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoana
DolZOral124_scaffold_826_26
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29755..30897
-----------------
DNA (1143bp)
protein (381aa)
glutaconyl-CoA decarboxylase beta subunit (EC:4.1.1.3 4.1.1.70)
Glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:KJR96535.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobul
Glutaconyl-CoA decarboxylase beta subunit id=1911331 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=unknown taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_826_27
Fusobacterium sp. oral taxon 370, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

30991..31407
-----------------
DNA (417bp)
protein (139aa)
Methyltransferase, YaeB family n=1 Tax=Fusobacterium sp. oral taxon 370 str. F0437 RepID=G6C6K9_9FUSO
Methyltransferase, YaeB family {ECO:0000313|EMBL:EHI75770.1}; TaxID=861452 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. oral taxon 370
hypothetical protein
DolZOral124_scaffold_826_28
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31621..32616
-----------------
DNA (996bp)
protein (332aa)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DF04_9FIRM rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
birA bifunctional protein
Displaying items 1-30 of 45 in total

View Taxonomy