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DolZOral124_scaffold_833

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_833_1
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(350..1894)
-----------------
DNA (1545bp)
protein (515aa)
Capsule polysaccharide biosynthesis protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WSS2_GEOS8 rbh
capsular polysaccharide biosynthesis protein
Capsule polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADW12230.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source=
DolZOral124_scaffold_833_2
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2352..3053
-----------------
DNA (702bp)
protein (234aa)
Glutathione S-transferase family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EXQ2_9RHOB
Glutathione S-transferase family protein {ECO:0000313|EMBL:EBA15532.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="R
glutathione S-transferase
DolZOral124_scaffold_833_3
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3056..4429
-----------------
DNA (1374bp)
protein (458aa)
sdaA; L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTT9_RUEPO rbh
Serine dehydratase {ECO:0000313|EMBL:KIC44666.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
DolZOral124_scaffold_833_4
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4403..5107)
-----------------
DNA (705bp)
protein (235aa)
Thiamine pyrophosphokinase-like protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZB27_ROSLO
thiamine pyrophosphokinase-like protein
Thiamine pyrophosphokinase-like protein {ECO:0000313|EMBL:AEI93020.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Ro
DolZOral124_scaffold_833_5
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5257..7323
-----------------
DNA (2067bp)
protein (689aa)
Lipoprotein, putative n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E2C0_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC50717.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. A
lipoprotein, putative
DolZOral124_scaffold_833_6
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7564..8799)
-----------------
DNA (1236bp)
protein (412aa)
Acyl-CoA dehydrogenase family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDA0_9RHOB rbh
Acyl-CoA dehydrogenase family protein {ECO:0000313|EMBL:EAQ44234.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Rose
acyl-CoA dehydrogenase-like protein
DolZOral124_scaffold_833_7
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9009..9449)
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI0002378DE1
Uncharacterized protein {ECO:0000313|EMBL:KII17632.1}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter sp. S
hypothetical protein
DolZOral124_scaffold_833_8
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9572..10222
-----------------
DNA (651bp)
protein (217aa)
rluA; ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
Pseudouridine synthase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RN49_9RHOB rbh
DolZOral124_scaffold_833_9
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10331..11425)
-----------------
DNA (1095bp)
protein (365aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DV25_9RHOB rbh
Hint domain protein {ECO:0000313|EMBL:KGM87976.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus D
hypothetical protein
DolZOral124_scaffold_833_10
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11444..13021)
-----------------
DNA (1578bp)
protein (526aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SI77_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAP77058.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhi
hypothetical protein
DolZOral124_scaffold_833_11
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13325..14473
-----------------
DNA (1149bp)
protein (383aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
Succinyl-diaminopimelate desuccinylase n=1 Tax=Roseobacter sp. MED193 RepID=A3XDE3_9RHOB rbh
succinyl-diaminopimelate desuccinylase
DolZOral124_scaffold_833_12
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14470..15045
-----------------
DNA (576bp)
protein (192aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EDM73510.1}; EC=3.5.1.18 {ECO:0000313|EMBL:EDM73510.1};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
Succinyl-diaminopimelate desuccinylase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FM92_9RHOB
hypothetical protein
DolZOral124_scaffold_833_13
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15173..17524
-----------------
DNA (2352bp)
protein (784aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=89187 species="Bacteria; Proteobacteria; Alpha
Ribonuclease R n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SRM5_9RHOB rbh
RNAse R
DolZOral124_scaffold_833_14
unknown

Not on your lists

comp(17414..17653)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

DolZOral124_scaffold_833_15
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17780..19162
-----------------
DNA (1383bp)
protein (461aa)
Lytic murein transglycosylase n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GC93_RUEST rbh
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:ABF65723.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (s
DolZOral124_scaffold_833_16
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19399..20187)
-----------------
DNA (789bp)
protein (263aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWX9_9GAMM
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:EEB79108.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobac
enoyl-CoA hydratase/isomerase
DolZOral124_scaffold_833_17
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20458..21216
-----------------
DNA (759bp)
protein (253aa)
UPI0003D6BF4B related cluster n=1 Tax=unknown RepID=UPI0003D6BF4B rbh
electron transfer flavoprotein beta subunit rbh
Uncharacterized protein {ECO:0000313|EMBL:AHD08059.1}; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter galla
DolZOral124_scaffold_833_18
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21216..22145
-----------------
DNA (930bp)
protein (310aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Roseobacter sp. MED193 RepID=A3X479_9RHOB rbh
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KAJ04616.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" sourc
electron transfer flavoprotein subunit alpha
DolZOral124_scaffold_833_19
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22214..23056)
-----------------
DNA (843bp)
protein (281aa)
Putative uncharacterized protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RL27_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD12402.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
DolZOral124_scaffold_833_20
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23208..24083
-----------------
DNA (876bp)
protein (292aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EDZ41921.1}; EC=1.1.1.157 {ECO:0000313|EMBL:EDZ41921.1};; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157 1.1.1.35)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AVN6_9RHOB rbh
DolZOral124_scaffold_833_21
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24199..25077)
-----------------
DNA (879bp)
protein (293aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TVE9_9RHOB rbh
Acyltransferase {ECO:0000313|EMBL:KGM50470.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;
hypothetical protein
DolZOral124_scaffold_833_22
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25131..25409)
-----------------
DNA (279bp)
protein (93aa)
Phosphocarrier protein HPr n=1 Tax=Sagittula stellata E-37 RepID=A3K982_9RHOB
Phosphocarrier protein HPr {ECO:0000313|EMBL:EBA06254.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellat
phosphocarrier protein HPr
DolZOral124_scaffold_833_23
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25419..25808)
-----------------
DNA (390bp)
protein (130aa)
PTS system IIA component, Man family protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3ST53_9RHOB
PTS system permease (IIAMan), nitrogen regulatory IIA protein {ECO:0000313|EMBL:EYD74532.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rub
PTS system mannose-specific EIIA component-like protein
DolZOral124_scaffold_833_24
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25870..26715)
-----------------
DNA (846bp)
protein (282aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Oceanicola sp. S124 RepID=UPI00025599E9 rbh
Nucleotide-binding protein RAZWK3B_09386 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" sourc
hypothetical protein
DolZOral124_scaffold_833_25
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26797..27105)
-----------------
DNA (309bp)
protein (103aa)
HPr kinase n=1 Tax=Oceanicola sp. S124 RepID=UPI00025599E8
Putative kinase/phosphatase {ECO:0000313|EMBL:EAQ04499.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola bats
HPr kinase
DolZOral124_scaffold_833_26
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27220..28944)
-----------------
DNA (1725bp)
protein (575aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
chvG; sensor protein chvG (histidine kinase sensory protein exoS) (EC:2.7.13.3)
Sensor histidine kinase ChvG n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DVR4_9RHOB rbh
DolZOral124_scaffold_833_27
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28950..29651)
-----------------
DNA (702bp)
protein (234aa)
DNA-binding response regulator ChvI n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TVF5_9RHOB rbh
Transcriptional regulator {ECO:0000313|EMBL:KIC52010.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp.
chvI; two component signal transduction response regulator receiver protein ChvI
DolZOral124_scaffold_833_28
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29999..31597
-----------------
DNA (1599bp)
protein (533aa)
pckA; phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDT6_9RHOB rbh
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
DolZOral124_scaffold_833_29
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31752..32582
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EMJ0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA11077.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. CC
hypothetical protein
DolZOral124_scaffold_833_30
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32579..33373)
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TVF9_9RHOB rbh
Membrane protein {ECO:0000313|EMBL:KGM50461.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.
putative permease
Displaying items 1-30 of 46 in total

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