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DolZOral124_scaffold_855

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_855_1
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1473
-----------------
DNA (1473bp)
protein (491aa)
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium sp. CAG:127 RepID=R5NU37_9CLOT
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_855_2
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1542..3032
-----------------
DNA (1491bp)
protein (497aa)
SpoIID/LytB domain protein id=1861970 bin=GWD2_Clostridiales_32_59 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
SpoIID/LytB domain-containing protein
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_855_3
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3289..4560)
-----------------
DNA (1272bp)
protein (424aa)
AP superfamily n=3 Tax=Clostridium acetobutylicum RepID=F0K5R6_CLOAE rbh
AP endonuclease
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_855_4
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5566..6009
-----------------
DNA (444bp)
protein (148aa)
UPF0735 ACT domain-containing protein Closa_0616 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4R0_CLOSW
UPF0735 ACT domain-containing protein K413DRAFT_0237 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
amino acid-binding ACT protein
DolZOral124_scaffold_855_5
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6013..7230
-----------------
DNA (1218bp)
protein (406aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source
Homoserine dehydrogenase n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L144_9FIRM rbh
homoserine dehydrogenase
DolZOral124_scaffold_855_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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7233..8444
-----------------
DNA (1212bp)
protein (404aa)
phosphoglycerate mutase (EC:5.4.2.1)
Proposed homoserine kinase n=2 Tax=Anaerostipes RepID=E5VUH8_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_855_7
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8456..9679
-----------------
DNA (1224bp)
protein (408aa)
Aspartokinase n=1 Tax=Clostridium sp. ASF356 RepID=N1Z1V8_9CLOT rbh
aspartate kinase
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_855_8
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9874..10338
-----------------
DNA (465bp)
protein (155aa)
ATPase, YjeE family n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1R1_CLOCD
YjeE family ATPase
ATPase, YjeE family {ECO:0000313|EMBL:AEV70290.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain
DolZOral124_scaffold_855_9
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

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10331..11038
-----------------
DNA (708bp)
protein (236aa)
Inactive homolog of metal-dependent proteases, putative molecular chaperone n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJP3_9FIRM
Peptidase M22 {ECO:0000313|EMBL:KJS11922.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
DolZOral124_scaffold_855_10
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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11038..11478
-----------------
DNA (441bp)
protein (147aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ACI21889.1}; EC=2.3.1.128 {ECO:0000313|EMBL:ACI21889.1};; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Ther
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJL0_THEYD
DolZOral124_scaffold_855_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11471..12376
-----------------
DNA (906bp)
protein (302aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=2 Tax=Ruminococcus RepID=C6JDF4_9FIRM
DolZOral124_scaffold_855_12
unknown

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12393..13016
-----------------
DNA (624bp)
protein (208aa)

This feature has no annotations

DolZOral124_scaffold_855_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13006..14028
-----------------
DNA (1023bp)
protein (341aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Clostridium symbiosum RepID=U2BBY2_CLOSY
DolZOral124_scaffold_855_14
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14094..15767
-----------------
DNA (1674bp)
protein (558aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium sp. AS15 RepID=J5GPR7_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EJP20293.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae
putative sensory box/ggdef family protein
DolZOral124_scaffold_855_15
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15770..17428
-----------------
DNA (1659bp)
protein (553aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HS22_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHL18117.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostrept
GGDEF domain-containing protein
DolZOral124_scaffold_855_16
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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17447..19144
-----------------
DNA (1698bp)
protein (566aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9X9S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL20171.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
putative sensory box/ggdef family protein
DolZOral124_scaffold_855_17
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19160..20863
-----------------
DNA (1704bp)
protein (568aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium sp. AS15 RepID=J5H273_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EJP23383.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae
putative sensory box/ggdef family protein
DolZOral124_scaffold_855_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20886..21371
-----------------
DNA (486bp)
protein (162aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rR
Ribosomal RNA large subunit methyltransferase H n=4 Tax=Clostridium RepID=E7GUE6_CLOSY
conserved hypothetical protein TIGR00246
DolZOral124_scaffold_855_19
unknown

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comp(21777..22223)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

DolZOral124_scaffold_855_20
unknown

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comp(22214..22414)
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

DolZOral124_scaffold_855_21
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

22738..23202
-----------------
DNA (465bp)
protein (155aa)
Ribosome maturation factor RimP n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WGB8_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG
hypothetical protein
DolZOral124_scaffold_855_22
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23218..24555
-----------------
DNA (1338bp)
protein (446aa)
Transcription termination factor NusA n=1 Tax=Clostridium sp. ASF356 RepID=N1ZM86_9CLOT
transcription termination factor NusA
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_855_23
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24536..24808
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=2 Tax=Peptoniphilus RepID=E0NM50_9FIRM
Predicted nucleic-acid-binding protein implicated in transcription termination
Uncharacterized protein {ECO:0000313|EMBL:EFM25105.1}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BA
DolZOral124_scaffold_855_24
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24801..25103
-----------------
DNA (303bp)
protein (101aa)
Ribosomal protein L7Ae n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LV28_9FIRM
Ribosomal protein L7Ae {ECO:0000313|EMBL:EHO52681.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0
ribosomal protein L7Ae/L30e/S12e/Gadd45
DolZOral124_scaffold_855_25
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25128..27632
-----------------
DNA (2505bp)
protein (835aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium sp. CAG:505 RepID=R7B976_9CLOT
translation initiation factor IF-2
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_855_26
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27635..28012
-----------------
DNA (378bp)
protein (126aa)
Ribosome-binding factor A n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L617_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environ
ribosome-binding factor A
DolZOral124_scaffold_855_27
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27987..28949
-----------------
DNA (963bp)
protein (321aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZFH4_9FIRM
Exopolyphosphatase-related proteins
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_855_28
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28933..29808
-----------------
DNA (876bp)
protein (292aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=2 Tax=root RepID=R5ZFX0_9FIRM
tRNA pseudouridine synthase B
DolZOral124_scaffold_855_29
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29813..30727
-----------------
DNA (915bp)
protein (305aa)
RibF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridium sp. ASF356 RepID=N1ZH03_9CLOT
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_855_30
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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30793..31299
-----------------
DNA (507bp)
protein (169aa)
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JMD5_CELLD
HAD superfamily phosphatase
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 {ECO:0000313|EMBL:ADZ83453.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" sourc
Displaying items 1-30 of 51 in total

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