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DolZOral124_scaffold_911

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_911_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1210
-----------------
DNA (1209bp)
protein (403aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00030B2FA8
DolZOral124_scaffold_911_2
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1216..1986
-----------------
DNA (771bp)
protein (257aa)
MCP methyltransferase, CheR-type n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I2T5_CLOCE
CheR-type MCP methyltransferase
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ACL76078.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulo
DolZOral124_scaffold_911_3
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2076..2381)
-----------------
DNA (306bp)
protein (102aa)
Putative transcriptional regulator n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K6P2_CLOPA
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGK97366.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum
DolZOral124_scaffold_911_4
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2487..3911
-----------------
DNA (1425bp)
protein (475aa)
tRNA-i(6)A37 thiotransferase enzyme MiaB (EC:1.3.1.74)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=MIAB_ALKOO
DolZOral124_scaffold_911_5
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3967..6564
-----------------
DNA (2598bp)
protein (866aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWP3_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisaliniba
DNA mismatch repair protein MutS
DolZOral124_scaffold_911_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6557..8440
-----------------
DNA (1884bp)
protein (628aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV55_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisaliniba
DNA mismatch repair protein MutL
DolZOral124_scaffold_911_7
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8406..9356
-----------------
DNA (951bp)
protein (317aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PY35_CLOSD rbh
DolZOral124_scaffold_911_8
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9377..9622
-----------------
DNA (246bp)
protein (82aa)
RNA-binding protein Hfq n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=HFQ_ALKMQ
RNA chaperone Hfq
RNA-binding protein Hfq {ECO:0000255|HAMAP-Rule:MF_00436}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (
DolZOral124_scaffold_911_9
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9600..10889
-----------------
DNA (1290bp)
protein (430aa)
Aluminium resistance family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TR72_ALKMQ
aluminium resistance family protein
Aluminium resistance family protein {ECO:0000313|EMBL:ABR48690.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metallire
DolZOral124_scaffold_911_10
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10936..11577)
-----------------
DNA (642bp)
protein (214aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AYG3_9CLOT
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_911_11
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11710..12030
-----------------
DNA (321bp)
protein (107aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLL3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHO84696.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium
Peptidoglycan-binding lysin domain
DolZOral124_scaffold_911_12
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12062..13177)
-----------------
DNA (1116bp)
protein (372aa)
Integrase family protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFC8_ALKOO
Recombinase {ECO:0000313|EMBL:KJF28819.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
integrase family protein
DolZOral124_scaffold_911_13
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13170..14063)
-----------------
DNA (894bp)
protein (298aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. (strain WCH70) RepID=C5D6Z0_GEOSW
Uncharacterized protein {ECO:0000313|EMBL:EZP75432.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB3621.;"
hypothetical protein
DolZOral124_scaffold_911_14
unknown

Not on your lists

comp(14141..14392)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

DolZOral124_scaffold_911_15
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14420..15850)
-----------------
DNA (1431bp)
protein (477aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSU0_9CLOT
DolZOral124_scaffold_911_16
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15868..17421)
-----------------
DNA (1554bp)
protein (518aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=500633 species="Bacteria; Firmicutes; Clostridi
Ribonuclease Y n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZD1_9FIRM
phosphodiesterase
DolZOral124_scaffold_911_17
unknown

Not on your lists

comp(17447..17581)
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

DolZOral124_scaffold_911_18
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(17730..18740)
-----------------
DNA (1011bp)
protein (337aa)
Protein RecA n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EKI9_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1263011 species="Bacteria; Firmicut
recA protein
DolZOral124_scaffold_911_19
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18846..20069)
-----------------
DNA (1224bp)
protein (408aa)
Putative competence-damage inducible protein n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9KW83_9THEO
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobac
competence damage-inducible protein A
DolZOral124_scaffold_911_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20247..21263)
-----------------
DNA (1017bp)
protein (339aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35549.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.
SdhA; succinate dehydrogenase
DolZOral124_scaffold_911_21
Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21413..21952)
-----------------
DNA (540bp)
protein (180aa)
cdp-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ADQ40484.1}; EC=2.7.8.5 {ECO:0000313|EMBL:ADQ40484.1};; TaxID=632335 species="Bacteria; Firmicutes; Clostridia; Ther
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) RepID=E4S530_CALKI
DolZOral124_scaffold_911_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21918..23276)
-----------------
DNA (1359bp)
protein (453aa)
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Clostridium sordellii RepID=T0CKX7_CLOSO
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
radical SAM protein
DolZOral124_scaffold_911_23
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23278..25773)
-----------------
DNA (2496bp)
protein (832aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRJ6_ALKMQ
cell division protein FtsK
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:ABR48814.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alka
DolZOral124_scaffold_911_24
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25766..26326)
-----------------
DNA (561bp)
protein (187aa)
Segregation and condensation protein B n=2 Tax=Peptoniphilus RepID=D1VSI6_9FIRM
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus
segregation and condensation protein B
DolZOral124_scaffold_911_25
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26329..27078)
-----------------
DNA (750bp)
protein (250aa)
Segregation and condensation protein A n=1 Tax=Thermincola potens (strain JR) RepID=D5X7B6_THEPJ
chromosome segregation and condensation protein ScpA
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Therminc
DolZOral124_scaffold_911_26
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27087..28421)
-----------------
DNA (1335bp)
protein (445aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:CEQ07337.1}; EC=2.4.2.2 {ECO:0000313|EMBL:CEQ07337.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
Pyrimidine-nucleoside phosphorylase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CS89_CLOSO rbh
pyrimidine-nucleoside phosphorylase
DolZOral124_scaffold_911_27
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28423..29598)
-----------------
DNA (1176bp)
protein (392aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|H
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DVJ3_CLOSO
DolZOral124_scaffold_911_28
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29600..30775)
-----------------
DNA (1176bp)
protein (392aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SDD5_CALK2
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:KAJ52622.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomo
diguanylate cyclase with gaf sensor
DolZOral124_scaffold_911_29
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30762..32483)
-----------------
DNA (1722bp)
protein (574aa)
DNA repair protein RecN n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YYT3_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae
DNA repair protein RecN
DolZOral124_scaffold_911_30
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32527..32976)
-----------------
DNA (450bp)
protein (150aa)
Arginine repressor n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=ARGR_ALKOO
argR; arginine repressor
Arginine repressor {ECO:0000255|HAMAP-Rule:MF_00173}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhI
Displaying items 1-30 of 44 in total

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