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DolZOral124_scaffold_924

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_924_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..637
-----------------
DNA (636bp)
protein (212aa)
Signal recognition particle protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NJW0_DESSD
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desul
DolZOral124_scaffold_924_2

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716..964
-----------------
DNA (249bp)
protein (83aa)
30S ribosomal protein S16 n=1 Tax=uncultured bacterium RepID=K1XXD3_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
30S ribosomal protein S16
DolZOral124_scaffold_924_3
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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971..1201
-----------------
DNA (231bp)
protein (77aa)
UPF0109 protein UWK_03354 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PU61_DESSD
putative RNA-binding protein (contains KH domain)
UPF0109 protein UWK_03354 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfoc
DolZOral124_scaffold_924_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1213..1761
-----------------
DNA (549bp)
protein (183aa)
Ribosome maturation factor RimM n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PE63_DESSD
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbac
DolZOral124_scaffold_924_5
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1776..2552
-----------------
DNA (777bp)
protein (259aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P8S3_DESSD
tRNA (guanine-N1)-methyltransferase
DolZOral124_scaffold_924_6
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2542..3114
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AJE7_DESPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG37533.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea ps
DolZOral124_scaffold_924_7
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3197..3547
-----------------
DNA (351bp)
protein (117aa)
50S ribosomal protein L19 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RL19_DESPS
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000255|HAMAP-Rule:MF_00402}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfota
DolZOral124_scaffold_924_8
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3740..4378
-----------------
DNA (639bp)
protein (213aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
RNase HII (EC:3.1.26.4)
Ribonuclease HII id=2172914 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_924_9
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4368..4739
-----------------
DNA (372bp)
protein (124aa)
UPF0102 protein Dalk_4642 n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FNN9_DESAA
hypothetical protein
UPF0102 protein Dalk_4642 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="De
DolZOral124_scaffold_924_10
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4746..5744
-----------------
DNA (999bp)
protein (333aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=GWB2_Desulfobacterales_56_26_curated
4-hydroxythreonine-4-phosphate dehydrogenase id=2172911 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
DolZOral124_scaffold_924_11
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5741..6385
-----------------
DNA (645bp)
protein (215aa)
thymidylate kinase (EC:2.7.4.9) Tax=GWB2_Desulfobacterales_56_26_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=2172910 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_924_12
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6387..8111
-----------------
DNA (1725bp)
protein (575aa)
Tetratricopeptide TPR_1 repeat-containing protein id=2172909 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
tetratricopeptide repeat protein Tax=GWB2_Desulfobacterales_56_26_curated
tetratricopeptide repeat protein
DolZOral124_scaffold_924_13
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8108..8908
-----------------
DNA (801bp)
protein (267aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JB55_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KJR96567.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
hypothetical protein
DolZOral124_scaffold_924_14
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9004..10227)
-----------------
DNA (1224bp)
protein (408aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J555_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ09559.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
hypothetical protein
DolZOral124_scaffold_924_15
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10421..12988
-----------------
DNA (2568bp)
protein (856aa)
Radical SAM-linked protein/radical SAM family uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PE73_DESSD
radical SAM-linked protein/radical SAM family uncharacterized protein
Radical SAM-linked protein/radical SAM family uncharacterized protein {ECO:0000313|EMBL:AGF79882.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobul
DolZOral124_scaffold_924_16
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13227..14570
-----------------
DNA (1344bp)
protein (448aa)
tryptophan synthase, beta chain (EC:4.2.1.20) Tax=GWB2_Desulfobacterales_56_26_curated
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain id=2158620 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
DolZOral124_scaffold_924_17
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14580..15866
-----------------
DNA (1287bp)
protein (429aa)
D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NJX3_DESSD
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
DolZOral124_scaffold_924_18
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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15863..16672
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS02594.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
Hydrolase of the alpha/beta superfamily id=2248111 bin=GWB2_Desulfobacterales_56_26 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolZOral124_scaffold_924_19
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16920..17465)
-----------------
DNA (546bp)
protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PED6_DESSD
dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AGF79937.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="D
DolZOral124_scaffold_924_20
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17480..18556)
-----------------
DNA (1077bp)
protein (359aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46) Tax=GWB2_Desulfobacterales_56_26_curated
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase id=2172896 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_924_21
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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18809..20395
-----------------
DNA (1587bp)
protein (529aa)
Peptide chain release factor 3 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NK24_DESSD
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1536652 species="Bacteria; Proteobacteria; Deltapr
bacterial peptide chain release factor 3 (bRF-3)
DolZOral124_scaffold_924_22
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20426..20716)
-----------------
DNA (291bp)
protein (97aa)
UPF0251 protein UWK_03423 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PK86_DESSD
putative DNA-binding protein
UPF0251 protein UWK_03423 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfoc
DolZOral124_scaffold_924_23
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21334..21912
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y331_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJS02058.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
hypothetical protein
DolZOral124_scaffold_924_24
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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21916..24213
-----------------
DNA (2298bp)
protein (766aa)
Ntr two-component system sensor histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] Tax=GWB2_Desulfobacterales_56_26_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZHN4_9BACT
PAS domain S-box
DolZOral124_scaffold_924_25
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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24251..25615
-----------------
DNA (1365bp)
protein (455aa)
Related to two-component system response regulator (Ntr family) id=2172863 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
Tax=GWB2_Desulfobacterales_56_26_curated
DolZOral124_scaffold_924_26
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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25650..26630
-----------------
DNA (981bp)
protein (327aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacter
Delta-aminolevulinic acid dehydratase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PEE7_DESSD
delta-aminolevulinic acid dehydratase
DolZOral124_scaffold_924_27
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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comp(26781..27194)
-----------------
DNA (414bp)
protein (138aa)
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
DolZOral124_scaffold_924_28
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(27242..28360)
-----------------
DNA (1119bp)
protein (373aa)
Diguanylate cyclase (GGDEF) and hemerythrin-like metal-binding domain-containing protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5C2_DESSD
diguanylate cyclase (GGDEF) and hemerythrin-like metal-binding domain-containing protein
Diguanylate cyclase (GGDEF) and hemerythrin-like metal-binding domain-containing protein {ECO:0000313|EMBL:AGF76892.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobac
DolZOral124_scaffold_924_29
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28576..29289
-----------------
DNA (714bp)
protein (238aa)
ATPase AAA n=1 Tax=Desulfospira joergensenii RepID=UPI0003B7172D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW67184.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus
DolZOral124_scaffold_924_30
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(29360..30076)
-----------------
DNA (717bp)
protein (239aa)
amino acid ABC transporter ATPase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4BA1B
branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAI80404.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" s
Displaying items 1-30 of 44 in total

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