ggKbase home page

DolZOral124_scaffold_927

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_927_1
unknown

Not on your lists

1..1596
-----------------
DNA (1596bp)
protein (532aa)

This feature has no annotations

DolZOral124_scaffold_927_2
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1669..7068
-----------------
DNA (5400bp)
protein (1800aa)
Peptidase families S8 and S53 subfamily {ECO:0000313|EMBL:EGY77463.1}; EC=3.4.21.- {ECO:0000313|EMBL:EGY77463.1};; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilace
Peptidase families S8 and S53 subfamily n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D620_9FIRM rbh
Lactocepin
DolZOral124_scaffold_927_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7199..8392
-----------------
DNA (1194bp)
protein (398aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia;
ackA; acetate kinase AckA (EC:2.7.2.1)
acetate kinase n=1 Tax=Dehalobacter sp. E1 RepID=UPI00030E8E81 rbh
DolZOral124_scaffold_927_4
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8474..8971
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI98457.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
DolZOral124_scaffold_927_5
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8984..9160
-----------------
DNA (177bp)
protein (59aa)
50S ribosomal protein L32 n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZ29_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azor
rpmF; 50S ribosomal protein L32
DolZOral124_scaffold_927_6
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9425..10393
-----------------
DNA (969bp)
protein (323aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
Selenide, water dikinase n=1 Tax=Caloramator australicus RC3 RepID=I7J5H7_9CLOT rbh
selenide, water dikinase
DolZOral124_scaffold_927_7
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10412..11692
-----------------
DNA (1281bp)
protein (427aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AWK5_SYNWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI68899.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp
DolZOral124_scaffold_927_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11685..13124
-----------------
DNA (1440bp)
protein (480aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
selA; selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Clostridium ultunense Esp RepID=M1Z3M3_9CLOT rbh
DolZOral124_scaffold_927_9
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13151..15064
-----------------
DNA (1914bp)
protein (638aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Caloramator australicus RC3 RepID=I7KUY3_9CLOT
Translation elongation factor {ECO:0000313|EMBL:KGG80172.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azor
selB; selenocysteinyl-tRNA-specific translation factor
DolZOral124_scaffold_927_10
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15054..15737
-----------------
DNA (684bp)
protein (228aa)
Phosphate regulon transcriptional regulatory protein PhoB (SphR) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARM2_9CLOT
PhoP family transcriptional regulator {ECO:0000313|EMBL:KGG80171.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobac
two component transcriptional regulator
DolZOral124_scaffold_927_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15676..17163
-----------------
DNA (1488bp)
protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacte
histidine kinase (EC:2.7.13.3)
Sensory transduction histidine kinase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AT22_9CLOT
DolZOral124_scaffold_927_12
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17172..18047
-----------------
DNA (876bp)
protein (292aa)
Spore germination protein-like Gmad2 n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VRA1_THESW
Spore germination protein-like Gmad2
Spore germination protein-like Gmad2 {ECO:0000313|EMBL:AFK85046.1}; Flags: Precursor;; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family II
DolZOral124_scaffold_927_13
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

18306..19355
-----------------
DNA (1050bp)
protein (350aa)
Uncharacterized protein n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3L3T3_TREMA
Uncharacterized protein {ECO:0000313|EMBL:EPF31464.1}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
hypothetical protein
DolZOral124_scaffold_927_14
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19333..20085
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JM97_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF26125.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 355
hypothetical protein
DolZOral124_scaffold_927_15
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20072..21511
-----------------
DNA (1440bp)
protein (480aa)
Putative uncharacterized protein n=1 Tax=Actinobacillus minor NM305 RepID=C5S396_9PAST
Uncharacterized protein {ECO:0000313|EMBL:EER46556.1}; TaxID=637911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus mi
hypothetical protein
DolZOral124_scaffold_927_16
Campylobacter curvus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

21523..22188
-----------------
DNA (666bp)
protein (222aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Campylobacter curvus (strain 525.92) RepID=A7GX70_CAMC5
cupin 2 domain-containing protein
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:EAU00020.2}; TaxID=360105 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" s
DolZOral124_scaffold_927_17
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22616..23941
-----------------
DNA (1326bp)
protein (442aa)
Electron transport complex protein RnfC n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRL8_CLOSD rbh
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clos
rnfC; Electron transport complex protein
DolZOral124_scaffold_927_18
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23954..24886
-----------------
DNA (933bp)
protein (311aa)
Electron transport complex protein RnfD n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARR1_9CLOT rbh
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaero
rnfD; electron transport complex protein RnfD
DolZOral124_scaffold_927_19
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24886..25461
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037FF1ED
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clos
protein RnfG
DolZOral124_scaffold_927_20
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25474..26070
-----------------
DNA (597bp)
protein (199aa)
Putative inner membrane NADH-quinone reductase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRL5_CLOSD
rnfE; putative inner membrane NADH-quinone reductase
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostr
DolZOral124_scaffold_927_21
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26083..26664
-----------------
DNA (582bp)
protein (194aa)
Putative inner membrane subunit of an electron transport system n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRL4_CLOSD
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clos
rnfA; electron transport complex protein RnfA
DolZOral124_scaffold_927_22
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26683..26835
-----------------
DNA (153bp)
protein (51aa)
Electron transport complex protein RnfB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CT06_9CLOT
Electron transport complex protein RnfB {ECO:0000313|EMBL:KDR94057.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clost
RnfABCDGE type electron transport complex subunit B
DolZOral124_scaffold_927_23
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26953..27807
-----------------
DNA (855bp)
protein (285aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRL3_CLOSD
Electron transport complex, RnfABCDGE type, B subunit precursor
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:CBH21517.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" s
DolZOral124_scaffold_927_24
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28305..28937
-----------------
DNA (633bp)
protein (211aa)
HD domain protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GPQ5_FILAD
HD domain-containing protein
HD domain-containing protein {ECO:0000313|EMBL:EFE28758.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strai
DolZOral124_scaffold_927_25
unknown

Not on your lists

29043..29255
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

DolZOral124_scaffold_927_26
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29410..32670
-----------------
DNA (3261bp)
protein (1087aa)
Transglutaminase-like protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J6HM09_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EHL15271.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
S-layer domain-containing protein
DolZOral124_scaffold_927_27
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32725..33870)
-----------------
DNA (1146bp)
protein (382aa)
DEAD/DEAH box helicase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T0L0_CLOSG rbh
DEAD-box ATP-dependent RNA helicase CshA family protein {ECO:0000313|EMBL:KDR96432.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;
DEAD/DEAH box helicase
DolZOral124_scaffold_927_28
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

33985..34881
-----------------
DNA (897bp)
protein (299aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QVQ4_SPHPG rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AEV29346.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" so
DolZOral124_scaffold_927_29
unknown

Not on your lists

34902..35063
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

DolZOral124_scaffold_927_trna_1
unknown

Not on your lists

35141..35224
-----------------
DNA (84bp)
transferRNA
Displaying items 1-30 of 45 in total

View Taxonomy