ggKbase home page

DolZOral124_scaffold_948

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_948_1
unknown

Not on your lists

3..101
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

DolZOral124_scaffold_948_2
unknown

Not on your lists

922..1965
-----------------
DNA (1044bp)
protein (348aa)

This feature has no annotations

DolZOral124_scaffold_948_3
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2098..4050
-----------------
DNA (1953bp)
protein (651aa)
Uncharacterized protein {ECO:0000313|EMBL:EYE89579.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.
DolZOral124_scaffold_948_4
unknown

Not on your lists

4108..6048
-----------------
DNA (1941bp)
protein (647aa)

This feature has no annotations

DolZOral124_scaffold_948_5
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

6337..7239
-----------------
DNA (903bp)
protein (301aa)
UPI0002DCD3D1 related cluster n=1 Tax=unknown RepID=UPI0002DCD3D1
PF06250 family protein {ECO:0000313|EMBL:EIJ68920.1}; TaxID=1095747 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum subsp. fundul
conjugative transposon protein
DolZOral124_scaffold_948_6
Selenomonas sp. FOBRC6, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7376..7651)
-----------------
DNA (276bp)
protein (92aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Selenomonas sp. FOBRC6 RepID=J4XG49_9FIRM
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EJO22248.1}; TaxID=936572 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas
addiction module toxin, RelE/StbE family
DolZOral124_scaffold_948_7
Helicobacter fennelliae, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7648..7887)
-----------------
DNA (240bp)
protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:GAD18037.1}; TaxID=1325130 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacte
DolZOral124_scaffold_948_8
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8024..9022)
-----------------
DNA (999bp)
protein (333aa)
Protein HflC n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSS5_ALKMQ
HflC protein
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).
DolZOral124_scaffold_948_9
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9024..9971)
-----------------
DNA (948bp)
protein (316aa)
HflK protein n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RUT5_9CLOT
HflK protein {ECO:0000313|EMBL:CDF59321.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
HflK protein
DolZOral124_scaffold_948_10
Bacillus cibi, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10053..10922
-----------------
DNA (870bp)
protein (290aa)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002FC1A80
Ribonuclease {ECO:0000313|EMBL:KEZ47551.1}; TaxID=265729 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cibi.;"
ribonuclease
DolZOral124_scaffold_948_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10999..11802
-----------------
DNA (804bp)
protein (268aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
pyrroline-5-carboxylate reductase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288FFC4 rbh
DolZOral124_scaffold_948_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12487..13239
-----------------
DNA (753bp)
protein (251aa)
tRNA(Cytosine32)-2-thiocytidine synthetase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARH6_9CLOT
ATPase {ECO:0000313|EMBL:KGG79748.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
PP-loop domain-containing protein
DolZOral124_scaffold_948_13
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13223..14266)
-----------------
DNA (1044bp)
protein (348aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000373FD3C rbh
FMN reductase {ECO:0000313|EMBL:EYE89182.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
NADPH-dependent FMN reductase
DolZOral124_scaffold_948_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14291..15253)
-----------------
DNA (963bp)
protein (321aa)
L-lactate dehydrogenase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AXA0_9CLOT rbh
Lactate/malate dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:KIE45125.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
malate/lactate dehydrogenase-like protein
DolZOral124_scaffold_948_15
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15271..20160)
-----------------
DNA (4890bp)
protein (1630aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AYP6_9CLOT rbh
Cytidylyltransferase {ECO:0000313|EMBL:EYE89184.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
cytidylyltransferase
DolZOral124_scaffold_948_16
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20469..21512
-----------------
DNA (1044bp)
protein (348aa)
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RUG3_9CLOT rbh
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) {ECO:0000313|EMBL:CDF59028.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Cl
methyl-galactoside ABC transporter substrate-binding protein
DolZOral124_scaffold_948_17
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21646..23148
-----------------
DNA (1503bp)
protein (501aa)
Galactose/methyl galactoside import ATP-binding protein MglA {ECO:0000256|HAMAP-Rule:MF_01717}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01717};; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacter
Galactose/methyl galactoside ABC transporter, ATP-binding protein MglA n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WA94_FUSMR
galactose/methyl galactoside import ATP-binding protein MglA
DolZOral124_scaffold_948_18
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23165..24190
-----------------
DNA (1026bp)
protein (342aa)
Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RUJ4_9CLOT rbh
mglC; beta-methylgalactoside transporter inner membrane protein
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_948_19
Leptotrichia buccalis, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

24210..25376
-----------------
DNA (1167bp)
protein (389aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:M
Galactokinase n=1 Tax=Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) RepID=C7NB42_LEPBD
galactokinase
DolZOral124_scaffold_948_20
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25463..26965
-----------------
DNA (1503bp)
protein (501aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-g
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VGL9_9FIRM
DolZOral124_scaffold_948_21
Mycoplasma pulmonis, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

26958..27422
-----------------
DNA (465bp)
protein (155aa)
ogt; methylated-DNA--protein-cysteine methyltransferase (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase) (EC:2.1.1.63)
METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE (6-O-METHYLGUANINE-DNA METHYLTRANSFERASE) (O-6-METHYLGUANINE-DNA-ALKYLTRANSFERASE) {ECO:0000313|EMBL:CAC13268.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CAC13
METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE (6-O-METHYLGUANINE-DNA METHYLTRANSFERASE) (O-6-METHYLGUANINE-DNA-ALKYLTRANSFERASE) n=1 Tax=Mycoplasma pulmonis (strain UAB CTIP) RepID=Q98RB4_MYCPU
DolZOral124_scaffold_948_22
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27427..28485)
-----------------
DNA (1059bp)
protein (353aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=926559 species="Bacteria; Bacteroidetes; Fl
Aldose 1-epimerase n=1 Tax=Joostella marina DSM 19592 RepID=I3C7N6_9FLAO
aldose 1-epimerase
DolZOral124_scaffold_948_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29479..32886
-----------------
DNA (3408bp)
protein (1136aa)
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:EOD01518.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EOD01518.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
pbpA2; Penicillin-binding protein 1A (EC:2.4.1.- 3.4.-.-)
Multimodular transpeptidase-transglycosylase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWI4_9CLOT
DolZOral124_scaffold_948_24
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33204..34136
-----------------
DNA (933bp)
protein (311aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B4Z8_9FIRM
periplasmic solute binding protein
Uncharacterized protein {ECO:0000313|EMBL:EGG91494.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
DolZOral124_scaffold_948_25
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34240..34965
-----------------
DNA (726bp)
protein (242aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GEW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI56656.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
ABC transporter-like protein
DolZOral124_scaffold_948_26
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34958..35863
-----------------
DNA (906bp)
protein (302aa)
ABC 3 transport family protein n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N8N3_9FIRM
ABC 3 transport family protein {ECO:0000313|EMBL:EFI41802.1}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral t
ABC-3 protein
DolZOral124_scaffold_948_27
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35860..36960
-----------------
DNA (1101bp)
protein (367aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LLW2_9FIRM
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EFU77161.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source
ABC-3 protein
DolZOral124_scaffold_948_28
unknown

Not on your lists

37068..37175
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

DolZOral124_scaffold_948_29
unknown

Not on your lists

37257..37382
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

DolZOral124_scaffold_948_30
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(37473..38117)
-----------------
DNA (645bp)
protein (215aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLA2_9FIRM
Displaying items 1-30 of 39 in total

View Taxonomy