ggKbase home page

DolZOral124_scaffold_951

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_951_1
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1411
-----------------
DNA (1410bp)
protein (470aa)
Uncharacterized protein n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PB81_DEFDS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF08075.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibact
DolZOral124_scaffold_951_2
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1688..2590
-----------------
DNA (903bp)
protein (301aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4Q6_9DELT
DolZOral124_scaffold_951_3
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2632..3222
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B76702
Uncharacterized protein {ECO:0000313|EMBL:EIM64470.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
hypothetical protein
DolZOral124_scaffold_951_4
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3273..5486
-----------------
DNA (2214bp)
protein (738aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterale
two component system sensor histidine kinase (EC:2.7.13.3)
histidine kinase n=1 Tax=Desulfobacter curvatus RepID=UPI00036FC695
DolZOral124_scaffold_951_5
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5514..6866
-----------------
DNA (1353bp)
protein (451aa)
Fis family transcriptional regulator n=1 Tax=Desulfospira joergensenii RepID=UPI0003B6D53F rbh
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIM64472.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacteral
two component transcriptional regulator, sigma54-specific
DolZOral124_scaffold_951_6
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6863..7414
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037E5C49
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EIM64473.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="D
hypothetical protein
DolZOral124_scaffold_951_7
RIFOXYB2_FULL_Desulfobacula_45_6_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7436..7951
-----------------
DNA (516bp)
protein (172aa)
coaD; phosphopantetheine adenylyltransferase CoaD (EC:2.7.7.3) Tax=RIFOXYB2_FULL_Desulfobacula_45_6_curated
coaD; phosphopantetheine adenylyltransferase CoaD (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0ND03_DESTT
DolZOral124_scaffold_951_8
unknown

Not on your lists

comp(8008..8121)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

DolZOral124_scaffold_951_9
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8177..9859
-----------------
DNA (1683bp)
protein (561aa)
N-methylhydantoinase A/acetone carboxylase, beta subunit {ECO:0000313|EMBL:EMS78395.1}; EC=3.5.2.14 {ECO:0000313|EMBL:EMS78395.1};; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria
hydantoinase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B67238 rbh
hydantoinase/oxoprolinase
DolZOral124_scaffold_951_10
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9880..11190
-----------------
DNA (1311bp)
protein (437aa)
Deacetylase, histone deacetylase/acetoin utilization protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4R4_9DELT
Deacetylase, histone deacetylase/acetoin utilization protein {ECO:0000313|EMBL:EIM64477.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; D
histone deacetylase family protein
DolZOral124_scaffold_951_11
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11292..12110
-----------------
DNA (819bp)
protein (273aa)
poxA; lysyl-tRNA synthetase PoxA (EC:6.1.1.6)
lysyl-tRNA synthetase n=1 Tax=Desulfobacter curvatus RepID=UPI000376E279
Lysyl-tRNA synthetase-like protein GenX {ECO:0000313|EMBL:EIM64478.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" sour
DolZOral124_scaffold_951_12
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12304..13686
-----------------
DNA (1383bp)
protein (461aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3BBC1
Long-chain fatty acid transport protein {ECO:0000313|EMBL:EIM64956.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; De
hydrocarbon degradation protein
DolZOral124_scaffold_951_13
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13764..14468)
-----------------
DNA (705bp)
protein (235aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4P8_9DELT
DolZOral124_scaffold_951_14
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14528..15535
-----------------
DNA (1008bp)
protein (336aa)
potassium transporter TrkA n=1 Tax=Desulfobacter curvatus RepID=UPI00036FBFE5
K+ transport system, NAD-binding component {ECO:0000313|EMBL:EIM64460.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae;
trkA; Trk system potassium NAD-binding peripheral membrane protein TrkA
DolZOral124_scaffold_951_15
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15669..16256)
-----------------
DNA (588bp)
protein (196aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacteral
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5,10-methenyltetrahydrofolate synthetase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4P6_9DELT
DolZOral124_scaffold_951_16
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16550..17830
-----------------
DNA (1281bp)
protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
serS; seryl-tRNA synthetase SerC (EC:6.1.1.11)
seryl-tRNA synthase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3D3DC rbh
DolZOral124_scaffold_951_17
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17820..19322
-----------------
DNA (1503bp)
protein (501aa)
thrC; threonine synthase ThrC (EC:4.2.3.1)
Threonine synthase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4P4_9DELT
Threonine synthase {ECO:0000313|EMBL:EIM64457.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter pos
DolZOral124_scaffold_951_18
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19319..20848
-----------------
DNA (1530bp)
protein (510aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003693ED5
Uncharacterized protein {ECO:0000313|EMBL:EIM64456.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
LysM domain-containing protein
DolZOral124_scaffold_951_19
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20845..21597
-----------------
DNA (753bp)
protein (251aa)
Tfp pilus assembly protein PilF n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4P2_9DELT
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:EIM64455.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobac
hypothetical protein
DolZOral124_scaffold_951_20
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21608..23947)
-----------------
DNA (2340bp)
protein (780aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037BA037
Type IV pilus secretin PilQ/competence protein {ECO:0000313|EMBL:EIM64454.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacterac
pilQ; type IV pilus secretin PilQ
DolZOral124_scaffold_951_21
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23949..24785)
-----------------
DNA (837bp)
protein (279aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B42673
pilP; pilus assembly protein PilP
PilP: pilus assembly protein {ECO:0000313|EMBL:CCK78755.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfo
DolZOral124_scaffold_951_22
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24798..25454)
-----------------
DNA (657bp)
protein (219aa)
pilus assembly protein PilO n=1 Tax=Desulfospira joergensenii RepID=UPI0003B45744
Tfp pilus assembly protein PilO {ECO:0000313|EMBL:EIM64452.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desu
pilO; pilus assembly protein PilO
DolZOral124_scaffold_951_23
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25454..26038)
-----------------
DNA (585bp)
protein (195aa)
Tfp pilus assembly protein PilN n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4N8_9DELT
Tfp pilus assembly protein PilN {ECO:0000313|EMBL:EIM64451.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobac
pilN; fimbrial assembly protein PilN
DolZOral124_scaffold_951_24
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26035..27087)
-----------------
DNA (1053bp)
protein (351aa)
Type IV pilus assembly protein PilM n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4N7_9DELT
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EIM64450.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulf
pilM; type IV pilus assembly protein PilM
DolZOral124_scaffold_951_25
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27298..28761
-----------------
DNA (1464bp)
protein (488aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterale
two component system sensor histidine kinase (EC:2.7.13.3)
transcriptional regulator n=1 Tax=Desulfobacter curvatus RepID=UPI0003810144
DolZOral124_scaffold_951_26
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28767..30152
-----------------
DNA (1386bp)
protein (462aa)
acetoacetate metabolism regulatory protein AtoC n=1 Tax=Desulfobacter curvatus RepID=UPI00037CA705
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIM64448.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacteral
two component system response regulator, sigma54-specific
DolZOral124_scaffold_951_27
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30535..31239)
-----------------
DNA (705bp)
protein (235aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003774EC8
Uncharacterized protein {ECO:0000313|EMBL:EIM64447.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
hypothetical protein
DolZOral124_scaffold_951_28
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31285..31740)
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4N3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIM64446.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
hypothetical protein
DolZOral124_scaffold_951_29
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32112..33140
-----------------
DNA (1029bp)
protein (343aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desul
dihydrouridine synthase n=1 Tax=Desulfobacter curvatus RepID=UPI000369E32F
dus; tRNA-dihydrouridine synthase Dus
DolZOral124_scaffold_951_30
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33091..33633
-----------------
DNA (543bp)
protein (181aa)
Fe-S osidoreductase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B6E75C
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:EIM64441.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfo
hypothetical protein
Displaying items 1-30 of 44 in total

View Taxonomy