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DolZOral124_scaffold_956

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_956_1
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185..3202)
-----------------
DNA (3018bp)
protein (1006aa)
Trk system potassium uptake protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B2U2_9RHOB
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tat
trkH-1; Trk system potassium uptake protein
DolZOral124_scaffold_956_2
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3868..4974)
-----------------
DNA (1107bp)
protein (369aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodob
GTP cyclohydrolase FolE2 n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FQI9_9RHOB rbh
hypothetical protein
DolZOral124_scaffold_956_3
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5324..5674)
-----------------
DNA (351bp)
protein (117aa)
Endoribonuclease L-PSP family protein n=1 Tax=Ruegeria sp. R11 RepID=B7QYJ1_9RHOB
Endoribonuclease L-PSP family protein {ECO:0000313|EMBL:EEB70103.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeri
endoribonuclease
DolZOral124_scaffold_956_4
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5822..7003)
-----------------
DNA (1182bp)
protein (394aa)
metZ; O-succinylhomoserine sulfhydrylase MetZ (EC:2.5.1.-)
O-succinylhomoserine sulfhydrylase MetZ n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7E2Q6_PHAIB rbh
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:KII14057.1}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeob
DolZOral124_scaffold_956_5
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7694..8557
-----------------
DNA (864bp)
protein (288aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DYB4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM33096.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM
hypothetical protein
DolZOral124_scaffold_956_6
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8854..9123)
-----------------
DNA (270bp)
protein (90aa)
C4-type zinc finger protein, DksA/TraR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTK3_RUEPO
C4-type zinc finger protein, DksA/TraR family
C4-type zinc finger protein, DksA/TraR family {ECO:0000313|EMBL:AAV94698.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source=
DolZOral124_scaffold_956_7
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9200..10453)
-----------------
DNA (1254bp)
protein (418aa)
Lipoprotein, putative n=1 Tax=Roseovarius sp. TM1035 RepID=A6DZ56_9RHOB rbh
Lipoprotein, putative {ECO:0000313|EMBL:EDM32441.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM10
hypothetical protein
DolZOral124_scaffold_956_8

Not on your lists

comp(10823..11146)
-----------------
DNA (324bp)
protein (108aa)
Ferredoxin VI n=1 Tax=Roseobacter sp. GAI101 RepID=B7RP67_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN37860.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
fdx; ferredoxin VI
DolZOral124_scaffold_956_9
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11650..11943
-----------------
DNA (294bp)
protein (98aa)
Lipoprotein, putative n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EXR2_9RHOB
Lipoprotein, putative {ECO:0000313|EMBL:EBA15542.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK20
lipoprotein, putative
DolZOral124_scaffold_956_10
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12471..13964)
-----------------
DNA (1494bp)
protein (498aa)
degP; protease do (EC:3.4.21.-)
Periplasmic serine protease, DO/DeqQ family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SMC5_9RHOB rbh
Periplasmic serine protease, DO/DeqQ family protein {ECO:0000313|EMBL:EAP75615.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;"
DolZOral124_scaffold_956_11
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14158..14367)
-----------------
DNA (210bp)
protein (70aa)
Putative uncharacterized protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CXA4_9RHOB
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_956_12
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14364..15233)
-----------------
DNA (870bp)
protein (290aa)
Protein HflC n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B2S5_9RHOB rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2083.;"
hflC; HflC protein
DolZOral124_scaffold_956_13
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15235..16392)
-----------------
DNA (1158bp)
protein (386aa)
HflK protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B2S4_9RHOB rbh
Membrane protein {ECO:0000313|EMBL:KGB80765.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
membrane protein
DolZOral124_scaffold_956_14
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16460..17815)
-----------------
DNA (1356bp)
protein (452aa)
gor; glutathione reductase Gor (EC:1.8.1.7)
Glutathione reductase Gor n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7EYS9_PHAIB rbh
NADPH-glutathione reductase {ECO:0000313|EMBL:KIC42344.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG
DolZOral124_scaffold_956_15

Not on your lists

comp(17857..18645)
-----------------
DNA (789bp)
protein (263aa)
rpiA; ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Roseobacter sp. GAI101 RepID=B7RHQ8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM93033.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DolZOral124_scaffold_956_16
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18882..19406
-----------------
DNA (525bp)
protein (175aa)
Transcriptional regulatory protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FMT8_9RHOB
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EAP75950.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" sour
transcriptional regulatory protein
DolZOral124_scaffold_956_17
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19409..19825
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00030099E7
Uncharacterized protein {ECO:0000313|EMBL:KIC35006.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein DUF306
DolZOral124_scaffold_956_18
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19800..20534)
-----------------
DNA (735bp)
protein (245aa)
DNA repair protein RecO n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FMT7_9RHOB rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=351016 species="Bacteria; Proteobacteria; Alp
DNA repair protein RecO, putative
DolZOral124_scaffold_956_19
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20556..21788)
-----------------
DNA (1233bp)
protein (411aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K8G1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA06640.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E
hypothetical protein
DolZOral124_scaffold_956_20
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21788..22735)
-----------------
DNA (948bp)
protein (316aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LKM6_RUEPO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV97487.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
DolZOral124_scaffold_956_21
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22732..23994)
-----------------
DNA (1263bp)
protein (421aa)
Aminotransferase, class III n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LKM7_RUEPO rbh
aminotransferase, class III
Aminotransferase, class III {ECO:0000313|EMBL:AAV97486.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi
DolZOral124_scaffold_956_22
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23991..25298)
-----------------
DNA (1308bp)
protein (436aa)
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase {ECO:0000313|EMBL:EEW60473.1}; EC=1.2.1.- {ECO:0000313|EMBL:EEW60473.1};; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rho
betaine-aldehyde dehydrogenase (EC:1.2.1.8) rbh
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CT83_9RHOB rbh
DolZOral124_scaffold_956_23
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25340..26986)
-----------------
DNA (1647bp)
protein (549aa)
UPI0003D6AF4A related cluster n=1 Tax=unknown RepID=UPI0003D6AF4A rbh
Membrane protein {ECO:0000313|EMBL:KIC11776.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
membrane protein
DolZOral124_scaffold_956_24
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26999..27529)
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVD2_RUEPO
Uncharacterized protein {ECO:0000313|EMBL:KIC16935.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
DolZOral124_scaffold_956_25
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27603..28544)
-----------------
DNA (942bp)
protein (314aa)
transporter n=1 Tax=Phaeobacter gallaeciensis RepID=UPI000312136C rbh
Transporter {ECO:0000313|EMBL:KID07565.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
transporter
DolZOral124_scaffold_956_26
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28713..29492
-----------------
DNA (780bp)
protein (260aa)
Transcriptional regulator, IclR family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BAN6_9RHOB
IclR family transcriptional regulator {ECO:0000313|EMBL:KIC16937.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leis
transcriptional regulator, IclR family
DolZOral124_scaffold_956_27
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29518..30876
-----------------
DNA (1359bp)
protein (453aa)
Aminotransferase {ECO:0000313|EMBL:ABF62685.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABF62685.1};; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruege
Aminotransferase n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GKY1_RUEST rbh
hypothetical protein
DolZOral124_scaffold_956_28
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30962..32137)
-----------------
DNA (1176bp)
protein (392aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TVH9_9RHOB rbh
Lytic transglycosylase {ECO:0000313|EMBL:KGM50435.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II
hypothetical protein
DolZOral124_scaffold_956_29
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32159..33061)
-----------------
DNA (903bp)
protein (301aa)
cobD; cobalamin biosynthesis protein (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FTP6_9RHOB rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Ro
DolZOral124_scaffold_956_30
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33058..33999)
-----------------
DNA (942bp)
protein (314aa)
Aminotransferase, class I and II n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FTP7_9RHOB rbh
Aminotransferase, class I and II {ECO:0000313|EMBL:EDM70276.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobact
cobC; threonine-phosphate decarboxylase CobC
Displaying items 1-30 of 44 in total

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