ggKbase home page

DolZOral124_scaffold_729_34

Organism: DolZOral124_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 34 / 38 MC: 25
Location: comp(39945..41402)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 504.0
  • Bit_score: 481
  • Evalue 3.40e-133
RNA polymerase factor sigma-54 n=1 Tax=Leucothrix mucor RepID=UPI0003B4C437 similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 475.0
  • Bit_score: 585
  • Evalue 5.90e-164
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 493.0
  • Bit_score: 534
  • Evalue 2.20e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGATTAAGCAGGGTTTAAACATCAAGCTTGGGCAATCGTTGTCCATGACTCCTCAGTTGCAGCAGGCGATTAAGCTCCTGCAACTCTCTTCAACAGAACTTGAACAAGAAATACAAGAAGTACTTGATACCAATCCACTTCTCGAAAGAGTAGAAGACACTGAATCCTCTGAAGAAAAAACCACATCAAATACTGAGCTAGACACCAAAGAAGTGAGTGAAGATAATATCCCGGAAGATATGAAGATCGATGCTGATTGGGATGATATTTATGATCCAGAATGGAAAACCTCAAATTCTGAAAACGCCAATGATACTAATGCATCAGATTTTATTGAAACGATGCATTCATCCGAAGAAGGCCTAACAGAACATTTGATGTGGCAAATCGAAATGAGTAATTTGAGCTTTCAAGACAAAGAAATTGCCAAGTTAATTGTTGATTACTTAGATGATGATGGTTACTTAACCGAGTCTCTAGAACGAATACATCAAACACTAGAGGATGTATTGCTTGTTGAACTAGATGAAGTTGAAGCCGTATTAACCTATGTCCAGCACCTCTCTCCCTGCGGTGTTGCAGCACGATCCTTAGGGGAATGCTTGATACTCCAATTAGAAAGTGACTATTCAAATCACCCATTATTTAAAAAAGCAAAACGTTTATTAGAAAATCAATTGGATTTACTGAAAAAAAGAGACTACACCCGCATTAAAAGAAATTTGAAAGTTTCCGATACCGTTCTAGAAAACCTCATACATTTAATCCGTAAACTGAACCCTAAACCTGGGAAGCTTTTTAATAATTCTTCAACTGACTATATCGTTCCAGATGTATATGTAAAAAAAGTTAAGGGTAAATGGAAAGTATCACTTAATGGGAGCACCAAAACAGAATTAAAAGTTAACCATTATTACGAAGACATGCTAAATGACTCAGCTAAAAAAACACCAAGCGAGCAAGAAACAGTCAAATATATCAAAGATAATCTACAACAAGCCAAATGGTTTATTCATAGCTTAGAGAATCGCAACAGTACTATTTTAAACGTCGCTCATGCAATTATCGAAAACCAGTTACCCTTTCTTCAATACGGCGAAGAAGCTATGAAACCAATGGTACTAAGTGATTTAGCGGATCAATTAGGTATCCATGAATCTACTGTGTCTCGTGTAACTACACGAAAATACATGCACACACCAAGAGGCGTGTATGAGTTTAAATATTTTTTCTCTAGCCATGTCAATACAGATACAGGAGGAGAATGCTCAGCAACAGCAATTCGGGCCATGATTAAAAGCTTAATTGCCAAGGAAAATCCAAAAAAACCACTGAGTGACAATAAATTAACTAATCTGCTCAATGATCAGGGAATCAATATTGCCCGACGCACGGTCGCAAAATACCGTGAAGCACAATCGATACCTTCTTCTCACGACCGTAAAATATTTGCATAA
PROTEIN sequence
Length: 486
MIKQGLNIKLGQSLSMTPQLQQAIKLLQLSSTELEQEIQEVLDTNPLLERVEDTESSEEKTTSNTELDTKEVSEDNIPEDMKIDADWDDIYDPEWKTSNSENANDTNASDFIETMHSSEEGLTEHLMWQIEMSNLSFQDKEIAKLIVDYLDDDGYLTESLERIHQTLEDVLLVELDEVEAVLTYVQHLSPCGVAARSLGECLILQLESDYSNHPLFKKAKRLLENQLDLLKKRDYTRIKRNLKVSDTVLENLIHLIRKLNPKPGKLFNNSSTDYIVPDVYVKKVKGKWKVSLNGSTKTELKVNHYYEDMLNDSAKKTPSEQETVKYIKDNLQQAKWFIHSLENRNSTILNVAHAIIENQLPFLQYGEEAMKPMVLSDLADQLGIHESTVSRVTTRKYMHTPRGVYEFKYFFSSHVNTDTGGECSATAIRAMIKSLIAKENPKKPLSDNKLTNLLNDQGINIARRTVAKYREAQSIPSSHDRKIFA*