ggKbase home page

DolZOral124_scaffold_1231_40

Organism: DolZOral124_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 34 / 38 MC: 25
Location: 35787..36518

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-28 subunit FliA/WhiG (EC:4.1.1.65) similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 241.0
  • Bit_score: 240
  • Evalue 6.50e-61
RNA polymerase sigma factor n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARE7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 242.0
  • Bit_score: 242
  • Evalue 6.10e-61
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 240.0
  • Bit_score: 257
  • Evalue 2.60e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 732
ATGTCTACATCAGATTTATGGAAAGCGTACAAATATAATAATGATAGAGAAGCTAAAGACCAGCTTATAATACAGAATGTTGAGTTAGTCAAGATTATAGCTGGACGGCTATATGTTAGTTATAATCAAAATGTTGATTATGATGATTTAGTCGGATATGGAATCATAGGACTTATGGATGCTATAGAAAAATTTGATATTACTAAAAACATTAAATTTTCTACTTATGCAAATATTAGAATTCGTGGTGCTATTGTAGACCAGATGAGGTCTCTTGATTGGATTCCAAGAACGACTAGGCAAAAATATAAAAATATAGAGTCAGCTATGGAAAAGTTGCAAAATGTTTATGGAGTTAATGTTTCAGATGAACTTTTGGCTGATGAATTAGGCATAAGCGTTGCGGAACTTCATAAAGATTTGGGTGAAGTTTCTAATTTAGCGATAACATCATTAGATAATAGTATGTATGAAAATGGAACTATTGATGTGGTATCAAAAAGTGTGGAGATGAGTCCTGAAAGCTCTCTTGATGAAAAAGAGATGACTAGAGAATTGCAAGATGCTATAGATATACTACCAGATAAAGAAAGAACTGTAATATCTCTTTATTATTATGAAGAATTGACTTATAGAGAAATATCAGAGATTATGGGCATTTCAGAATCGAGAATATCACAGATACATTCTAAGGCAATCACTAAATTAAAATTAAGAATAAAATCATTTTAG
PROTEIN sequence
Length: 244
MSTSDLWKAYKYNNDREAKDQLIIQNVELVKIIAGRLYVSYNQNVDYDDLVGYGIIGLMDAIEKFDITKNIKFSTYANIRIRGAIVDQMRSLDWIPRTTRQKYKNIESAMEKLQNVYGVNVSDELLADELGISVAELHKDLGEVSNLAITSLDNSMYENGTIDVVSKSVEMSPESSLDEKEMTRELQDAIDILPDKERTVISLYYYEELTYREISEIMGISESRISQIHSKAITKLKLRIKSF*