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DOLZORAL124_Porphyromonas_40_21

In projects: DOLZORAL124

Consensus taxonomy: Porphyromonas  →  Bacteroidales  →  Bacteroidia  →  Bacteroidetes  →  Bacteria

Displaying items 51-100 of 153 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
DolZOral124_scaffold_219276
Species: Porphyromonas cangingivalis (50%)
2 1235 bp 39.27 20.40 98.87
DolZOral124_scaffold_25504
Species: Porphyromonas catoniae (50%)
4 5556 bp 41.81 20.41 88.28
DolZOral124_scaffold_141135
Species: Porphyromonas sp. COT-239 OH1446 (50%)
2 1687 bp 42.26 20.45 98.52
DolZOral124_scaffold_156512
Species: Porphyromonas sp. COT-290 OH860 (100%)
3 1568 bp 42.16 20.47 91.45
DolZOral124_scaffold_279369
Genus: Porphyromonas (75%)
4 1040 bp 42.40 20.48 88.37
DolZOral124_scaffold_95970
Species: Porphyromonas sp. COT-290 OH860 (100%)
1 2207 bp 42.27 20.59 96.65
DolZOral124_scaffold_124868
Species: Porphyromonas sp. COT-290 OH860 (100%)
2 1839 bp 41.92 20.64 94.13
DolZOral124_scaffold_150707
Species: Porphyromonas sp. oral taxon 278 (66.67%)
3 1611 bp 39.54 20.67 95.90
DolZOral124_scaffold_305302
Species: Porphyromonas catoniae (50%)
2 1312 bp 41.01 20.69 99.70
DolZOral124_scaffold_214910
Species: Porphyromonas sp. oral taxon 278 (50%)
2 1253 bp 42.46 20.71 92.90
DolZOral124_scaffold_12208
Species: Porphyromonas gingivalis (100%)
1 9325 bp 40.54 20.72 94.97
DolZOral124_scaffold_292517
Species: Porphyromonas sp. COT-290 OH860 (100%)
2 1006 bp 41.85 20.73 99.90
DolZOral124_scaffold_64904
Species: Porphyromonas sp. COT-290 OH860 (50%)
4 2891 bp 41.92 20.81 96.51
DolZOral124_scaffold_78336
Species: Porphyromonas gingivalis (100%)
2 2713 bp 39.73 20.90 100.85
DolZOral124_scaffold_22281
Species: Porphyromonas gingivalis (50%)
2 6112 bp 38.65 20.91 91.10
DolZOral124_scaffold_35146
Species: Porphyromonas catoniae (66.67%)
3 4441 bp 38.03 20.91 92.41
DolZOral124_scaffold_285200
Species: Porphyromonas sp. COT-239 OH1446 (100%)
1 1025 bp 41.37 20.93 96.88
DolZOral124_scaffold_205657
Species: Porphyromonas sp. COT-290 OH860 (100%)
2 1447 bp 40.01 20.94 93.50
DolZOral124_scaffold_83678
Species: Porphyromonas sp. COT-290 OH860 (66.67%)
3 2427 bp 37.99 20.95 99.01
DolZOral124_scaffold_198011
Species: Porphyromonas sp. COT-290 OH860 (100%)
2 1328 bp 42.85 21.01 98.27
DolZOral124_scaffold_214778
Species: Porphyromonas cangingivalis (50%)
2 1254 bp 37.88 21.05 88.52
DolZOral124_scaffold_32460
Genus: Porphyromonas (66.67%)
3 4693 bp 41.79 21.13 85.60
DolZOral124_scaffold_213725
Genus: Porphyromonas (100%)
4 1672 bp 39.59 21.17 102.09
DolZOral124_scaffold_130394
Species: Porphyromonas sp. COT-290 OH860 (100%)
2 1783 bp 42.29 21.20 95.06
DolZOral124_scaffold_100344
Species: Porphyromonas cangingivalis (50%)
2 3034 bp 41.17 21.31 95.81
DolZOral124_scaffold_47445
Species: Porphyromonas sp. COT-290 OH860 (100%)
1 3603 bp 41.08 21.32 100.00
DolZOral124_scaffold_49369
Species: Porphyromonas sp. COT-290 OH860 (60%)
5 3500 bp 37.29 21.34 92.14
DolZOral124_scaffold_180238
Species: Porphyromonas sp. COT-290 OH860 (100%)
2 1419 bp 42.49 21.35 97.89
DolZOral124_scaffold_250546
Species: Porphyromonas sp. KLE 1280 (50%)
2 1124 bp 40.93 21.35 98.22
DolZOral124_scaffold_69852
Species: Porphyromonas sp. COT-290 OH860 (66.67%)
3 2747 bp 40.12 21.35 98.07
DolZOral124_scaffold_78590
Species: Porphyromonas sp. COT-239 OH1446 (50%)
4 2535 bp 41.85 21.42 95.62
DolZOral124_scaffold_91111
Species: Porphyromonas sp. COT-290 OH860 (100%)
2 2288 bp 40.17 21.44 83.79
DolZOral124_scaffold_258869
Species: Porphyromonas sp. CAG:1061 (50%)
2 1098 bp 41.35 21.45 97.27
DolZOral124_scaffold_41003
Species: Porphyromonas sp. COT-290 OH860 (66.67%)
3 3992 bp 40.91 21.46 76.35
DolZOral124_scaffold_59940
Genus: Porphyromonas (50%)
6 5425 bp 42.30 21.51 83.39
DolZOral124_scaffold_232672
Species: Porphyromonas sp. COT-290 OH860 (100%)
2 1276 bp 42.08 21.51 94.98
DolZOral124_scaffold_154894
Species: Porphyromonas sp. COT-290 OH860 (50%)
2 1580 bp 39.75 21.55 99.11
DolZOral124_scaffold_83590
Species: Porphyromonas sp. COT-290 OH860 (66.67%)
3 2625 bp 38.51 21.60 99.66
DolZOral124_scaffold_268705
Species: Porphyromonas sp. COT-290 OH860 (100%)
1 1069 bp 43.22 21.61 99.91
DolZOral124_scaffold_276628
Species: Porphyromonas sp. COT-290 OH860 (100%)
1 1047 bp 40.88 21.63 99.71
DolZOral124_scaffold_171355
Genus: Porphyromonas (66.67%)
3 1819 bp 39.42 21.69 93.51
DolZOral124_scaffold_161057
Species: Porphyromonas sp. COT-239 OH1446 (50%)
2 1537 bp 39.10 21.76 76.71
DolZOral124_scaffold_7371
Species: Porphyromonas sp. COT-290 OH860 (50%)
12 13395 bp 39.99 21.84 88.62
DolZOral124_scaffold_425358
Species: Porphyromonas gingivalis (100%)
3 1172 bp 39.68 21.89 83.70
DolZOral124_scaffold_14810
Genus: Porphyromonas (66.67%)
6 8159 bp 42.21 21.93 80.75
DolZOral124_scaffold_258479
Species: Porphyromonas catoniae (50%)
2 1099 bp 38.13 21.97 95.00
DolZOral124_scaffold_206302
Species: Porphyromonas gingivalis (50%)
2 1290 bp 39.22 21.98 87.44
DolZOral124_scaffold_207999
Species: Porphyromonas sp. COT-290 OH860 (100%)
1 1282 bp 41.89 22.00 79.80
DolZOral124_scaffold_169249
Species: Porphyromonas uenonis (100%)
1 1484 bp 37.53 22.04 49.53
DolZOral124_scaffold_260393
Species: Porphyromonas sp. COT-290 OH860 (100%)
1 1093 bp 38.98 22.10 99.91
Displaying items 51-100 of 153 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.