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DOLZORAL124_Gammaproteobacteria_39_38

In projects: DOLZORAL124

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: DolZOral124_UNK

Properties

Avg. coverage: 37.53 Longest contig: 10.72 Kbp Bin length: 152.56 Kbp GC content: 38.99 %
Contigs count: 85 Features count: 211 rRNAs count: 0 tRNAs count: 2

Genome completeness

partial RP 6 / 55 MC: 1 BSCG 7 / 51 ASCG 0 / 38
Displaying items 1-50 of 85 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
DolZOral124_scaffold_18576
Class: Gammaproteobacteria (53.85%)
13 10724 bp 38.82 38.21 96.06
DolZOral124_scaffold_129219
Class: Gammaproteobacteria (71.43%)
7 3430 bp 40.50 37.26 97.70
DolZOral124_scaffold_63870
Species: Moraxella macacae (57.14%)
7 5604 bp 39.28 37.85 91.92
DolZOral124_scaffold_44279
Class: Gammaproteobacteria (100%)
7 4415 bp 40.11 36.93 88.27
DolZOral124_scaffold_56427
Class: Gammaproteobacteria (100%)
6 3183 bp 41.03 37.65 87.56
DolZOral124_scaffold_112023
Class: Gammaproteobacteria (60%)
5 2625 bp 41.07 37.94 86.06
DolZOral124_scaffold_182458
Class: Gammaproteobacteria (60%)
5 4211 bp 35.43 37.44 93.68
DolZOral124_scaffold_73492
Genus: Pseudomonas (50%)
4 2995 bp 41.90 37.76 81.84
DolZOral124_scaffold_37855
Genus: Haemophilus (50%)
4 4395 bp 37.50 36.66 88.33
DolZOral124_scaffold_94600
Class: Gammaproteobacteria (50%)
4 2228 bp 42.50 38.11 66.38
DolZOral124_scaffold_73161
Class: Gammaproteobacteria (75%)
4 2662 bp 36.03 38.37 95.34
DolZOral124_scaffold_39474
Genus: Acinetobacter (75%)
4 4095 bp 38.12 37.18 22.86
DolZOral124_scaffold_332760
Class: Gammaproteobacteria (50%)
4 1822 bp 35.95 37.71 67.34
DolZOral124_scaffold_53634
Class: Gammaproteobacteria (50%)
4 3299 bp 40.44 37.15 84.48
DolZOral124_scaffold_112945
Order: Vibrionales (66.67%)
3 1971 bp 42.01 38.43 89.19
DolZOral124_scaffold_198459
Class: Gammaproteobacteria (66.67%)
3 1743 bp 37.75 37.61 87.09
DolZOral124_scaffold_224992
Class: Gammaproteobacteria (66.67%)
3 1213 bp 39.41 37.35 84.34
DolZOral124_scaffold_166065
Class: Gammaproteobacteria (66.67%)
3 1504 bp 37.30 38.10 97.54
DolZOral124_scaffold_111979
Class: Gammaproteobacteria (100%)
3 1984 bp 39.47 37.95 96.62
DolZOral124_scaffold_196840
Order: Pasteurellales (66.67%)
3 1334 bp 37.18 36.66 91.08
DolZOral124_scaffold_68451
Class: Gammaproteobacteria (66.67%)
3 2785 bp 41.08 37.54 97.49
DolZOral124_scaffold_226502
Class: Gammaproteobacteria (66.67%)
3 1207 bp 37.45 37.66 66.86
DolZOral124_scaffold_281459
Order: Pasteurellales (66.67%)
3 1456 bp 38.19 38.02 90.87
DolZOral124_scaffold_254894
Class: Gammaproteobacteria (66.67%)
3 1110 bp 40.72 37.70 88.38
DolZOral124_scaffold_342569
Order: Pasteurellales (100%)
3 1227 bp 40.34 37.78 100.98
DolZOral124_scaffold_167001
Species: Osedax symbiont Rs1 (50%)
2 1498 bp 41.32 37.35 91.12
DolZOral124_scaffold_215722
Species: Mannheimia varigena (50%)
2 1249 bp 41.71 37.35 91.51
DolZOral124_scaffold_434299
Species: Photobacterium iliopiscarium (50%)
2 1096 bp 38.96 37.36 84.58
DolZOral124_scaffold_134256
Species: Pasteurella multocida (50%)
2 1747 bp 37.26 37.52 72.64
DolZOral124_scaffold_291258
Species: Cardiobacterium hominis (50%)
2 1009 bp 40.83 38.06 93.06
DolZOral124_scaffold_62912
Species: Colwellia psychrerythraea (50%)
2 2954 bp 37.51 36.87 77.79
DolZOral124_scaffold_276382
Species: Thioalkalivibrio nitratireducens (50%)
2 1047 bp 36.49 36.68 73.35
DolZOral124_scaffold_145566
Species: Enhydrobacter aerosaccus (50%)
2 1827 bp 36.56 36.70 100.00
DolZOral124_scaffold_289854
Species: Actinobacillus minor (50%)
2 1259 bp 35.27 36.58 100.79
DolZOral124_scaffold_225368
Species: Agarivorans albus (50%)
2 1211 bp 37.24 37.41 84.72
DolZOral124_scaffold_269831
Species: Methyloglobulus morosus (50%)
2 1066 bp 39.12 37.43 95.97
DolZOral124_scaffold_240373
Species: Kangiella geojedonensis (50%)
2 1158 bp 36.70 37.95 89.38
DolZOral124_scaffold_192321
Species: Nitrincola lacisaponensis (50%)
2 1356 bp 41.00 38.16 93.36
DolZOral124_scaffold_444849
Species: Haemophilus sputorum (50%)
2 1041 bp 36.70 38.47 84.15
DolZOral124_scaffold_294071
Species: Candidatus Contendobacter odensis (50%)
2 1003 bp 38.68 37.69 88.83
DolZOral124_scaffold_159239
Species: Methylomonas methanica (50%)
2 1549 bp 36.93 37.57 51.90
DolZOral124_scaffold_268777
Species: Cardiobacterium valvarum (50%)
2 1069 bp 40.97 38.45 87.56
DolZOral124_scaffold_175493
Species: RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated (50%)
2 1446 bp 37.76 36.93 68.67
DolZOral124_scaffold_437878
Species: Actinobacillus succinogenes (50%)
2 1099 bp 41.67 37.67 95.81
DolZOral124_scaffold_271871
Species: Shewanella sediminis (50%)
2 1060 bp 38.40 36.65 91.98
DolZOral124_scaffold_268804
Species: Candidatus Contendobacter odensis (50%)
2 1069 bp 38.35 37.75 90.93
DolZOral124_scaffold_149858
Species: Enhydrobacter aerosaccus (50%)
2 1617 bp 40.07 37.29 95.18
DolZOral124_scaffold_501636
Species: Enhydrobacter aerosaccus (50%)
2 1096 bp 35.49 38.05 81.84
DolZOral124_scaffold_212915
Species: Enhydrobacter aerosaccus (50%)
2 1373 bp 39.26 36.60 98.76
DolZOral124_scaffold_362285
Species: Pasteurella multocida (50%)
2 1360 bp 39.56 38.49 87.13
Displaying items 1-50 of 85 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.