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DORA_VCM_1_2

Organism: DORA_Varibaculum_cambriense

near complete RP 51 / 55 MC: 14 BSCG 48 / 51 ASCG 13 / 38
Location: 232..495

Top 3 Functional Annotations

Value Algorithm Source
Putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA44_GARV4 (db=UNIREF evalue=6.5e-17 bit_score=92.0 identity=62.2 coverage=80.68181818181817) similarity UNIREF
DB: UNIREF
  • Identity: 62.0
  • Coverage: 80.0
  • Bit_score: 92
  • Evalue 6.00e+00
Uncharacterized protein {ECO:0000313|EMBL:ETI82421.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 174
  • Evalue 7.80e-41
toxin-antitoxin system, antitoxin component similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 83.0
  • Bit_score: 92
  • Evalue 6.00e-17

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGAGCAAAACATTTGATACCTTAACCGCCGAGGCGATTGATAAAAAGTTTGACGACGGTGAGGACGTCCTCGAATGTTTTGATCTAGAAAACCCACAGGTAAATACCCCGCTGCGTTCAATCGAGCAGAAGCGGGTAACTCTCACAATGCCGGAGTGGATGATTCAGCGACTGGATAAGCAGGCAGCCGACCTGGCTATTTCTAGGAATGCAGTAATAAACACTTACCTGGCAGAAAAGCTTACTAACCAAGCACTGAGTTGA
PROTEIN sequence
Length: 88
MSKTFDTLTAEAIDKKFDDGEDVLECFDLENPQVNTPLRSIEQKRVTLTMPEWMIQRLDKQAADLAISRNAVINTYLAEKLTNQALS*