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DORA_VCM_1_11

Organism: DORA_Varibaculum_cambriense

near complete RP 51 / 55 MC: 14 BSCG 48 / 51 ASCG 13 / 38
Location: 7089..8180

Top 3 Functional Annotations

Value Algorithm Source
RNA pseudouridine synthase n=1 Tax=Rothia aeria F0474 RepID=I0UUU8_9MICC (db=UNIREF evalue=6.5e-31 bit_score=141.0 identity=31.6 coverage=90.65934065934066) similarity UNIREF
DB: UNIREF
  • Identity: 31.0
  • Coverage: 90.0
  • Bit_score: 141
  • Evalue 6.00e+00
RNA pseudouridine synthase {ECO:0000313|EMBL:ETI82430.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 363.0
  • Bit_score: 736
  • Evalue 2.20e-209
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 350.0
  • Bit_score: 164
  • Evalue 5.20e-38

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
GTGGGAAGACGTAGGAAGCGGAGGGCGGGGACACGTCCGCCTGCGCGGGGCGGAATTGATCCGGTGGGGTTTGTTTCTACTGGTCAGAAAGCTTTATCGCGGCAGTTGCAAGCCCAGCTGGAACGCAAACTATCACTGTCTACCAGTGAGATTGCGGATTTTGTAGTGAACGCGTTCGCGGCGGGGGATGTGGTGTCTCCCTTAGGGATCGCTTTATCCCCGGACAGCGAGCTTTTTGAGGGGCAACGCTACTACTTGCATCGAGTAGCTCCCGATGAGGACGCTGCTTTACCAAAGTTGCAGGTGCTTTGGGAGGGCGAGGGGGCAATCGTAGTTAATAAACCCGCTAGCCTGGCAACTATTCCCCGCGGCTCCTGGGTTACCCGCTCGGTGGTGGTAGCGGCTCGCCGCCAATTTAGAAACGACGAAATAACCGCTGCTCATCGCCTAGATCGCCTCACTACCGGATGTTTATTGCTGACCCTAGATCCGAAATGTCGGGCGCGTTACCAGCAGCTATTTGACCGCCGGCAAGTAAAGAAAACCTACTTGGCGCGCAGCCGCGGCGGTGGCGATAGGGGAGAAGGGGTGACTCCCCAGGTGGGGGAGTGTTTTGACTTCCAGCTCCCTATGTTTAAGGAAACCGGCTCGCTCACAGTATCGATAGGAGCGCCCCCGCGCGGGAAAAAGGTGGCGCGCTGCCAAAGCCGTACCCGCGGCCTCGTCCTCGGAAAATTCCCCCTCCCCGAAAAGGCAGAAAAGCCGGAGGGAGAGGGAAACGTAAACCCGGACAGCCAGGGACACGTGCCAGAAGAAGAATTATTGTGGCAGTTAGAGCCAGAAACCGGGTTTACTCATCAGCTGCGCGCCACCTTGGCGCATTTCGGGTATCCCCTGTTGGGCGACCCCCTCTATCCGGAAGTTTTGCCTGCAGATACCCCAGAAAATGTTGAGCCCCAGCTGTGCCTGCACGCCCAAGAGCTACAGTTTCCCGATCCGGAAAATCCTGCTAACACCGTAACCGTCACTGCCCCCACTCCCACCTGGGCAAAAGGCTATGAAAGTGCTAACAGCCCGAAGGGTTTGGCATGA
PROTEIN sequence
Length: 364
VGRRRKRRAGTRPPARGGIDPVGFVSTGQKALSRQLQAQLERKLSLSTSEIADFVVNAFAAGDVVSPLGIALSPDSELFEGQRYYLHRVAPDEDAALPKLQVLWEGEGAIVVNKPASLATIPRGSWVTRSVVVAARRQFRNDEITAAHRLDRLTTGCLLLTLDPKCRARYQQLFDRRQVKKTYLARSRGGGDRGEGVTPQVGECFDFQLPMFKETGSLTVSIGAPPRGKKVARCQSRTRGLVLGKFPLPEKAEKPEGEGNVNPDSQGHVPEEELLWQLEPETGFTHQLRATLAHFGYPLLGDPLYPEVLPADTPENVEPQLCLHAQELQFPDPENPANTVTVTAPTPTWAKGYESANSPKGLA*