ggKbase home page

rifcsphigho2_01_scaffold_14666_15

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_38_11

near complete RP 34 / 55 MC: 6 BSCG 6 / 51 ASCG 32 / 38
Location: 7683..8111

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=AR11 similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 132.0
  • Bit_score: 124
  • Evalue 1.20e-25
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 id=5043728 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 138.0
  • Bit_score: 107
  • Evalue 1.10e-20
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 94.0
  • Bit_score: 71
  • Evalue 1.80e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

AR11 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 429
ATGAAGCTATCACGCCCAAATTATTATCAGGGAATATTGCAGCTTAGGGACATCAATGATGAAATCCTTGATTTTGTGCACAACCAGATTAAAAAAAGAGGAGATGTCGCTGCAACCAAAATAGTAGGATTCCAAAATGGCATGGACATTTACCTGACCTCACAGAAATTTGTCACTATATTGGGCAAGAAGCTGAAAGACAACTTCGGAGGGGAGCTTAAAATAAGCTCAAAGCTGCATACAAAGAGCCGTCACGGCAAAGAGCTTTACAGGGTCAATGCATTATTCAGGCTTTCAAAGCACAAGGCAGGCGACGTTGTTTTAGTAAGGGGCGAAAGAGTCAGGCTTTTAAGCATAGGCAAAAAAGTATTTGCAAGGGACCTGAAAACCGGGAAAAAGGTCGCTATAAGGGGCAGCGAGCTACGCTAG
PROTEIN sequence
Length: 143
MKLSRPNYYQGILQLRDINDEILDFVHNQIKKRGDVAATKIVGFQNGMDIYLTSQKFVTILGKKLKDNFGGELKISSKLHTKSRHGKELYRVNALFRLSKHKAGDVVLVRGERVRLLSIGKKVFARDLKTGKKVAIRGSELR*