ggKbase home page

rifcsphigho2_01_scaffold_20654_20

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_29_23

partial RP 25 / 55 MC: 3 BSCG 17 / 51 ASCG 23 / 38 MC: 3
Location: comp(13494..14225)

Top 3 Functional Annotations

Value Algorithm Source
TrmB family transcriptional regulator Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 221.0
  • Bit_score: 307
  • Evalue 2.20e-80
transcriptional regulator TrmB id=5046026 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 242.0
  • Bit_score: 305
  • Evalue 5.90e-80
Transcriptional regulator, TrmB similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 244.0
  • Bit_score: 247
  • Evalue 3.10e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 732
ATGAATGAAACAATACTAGAAGATTTAGGATTAACATCTGGAGAAATTAAAGTCTATCTTTCTCTATTAGAAATAGGAAGTAGTAGTGCTGGTCCAATTATAGAAAAATCAAAACTTCAACATTCTGTTGTCCATAGAGCCTTAAATTCTCTTATTAACAAAGGATTGGTAAGTTACATACTAGAAGGTAAAAGAAAAATATATCAGGCTAGCAATCCTGAAAATTTCTATAATTTTATTGAAGAGAAAAAAGAGAAATTTAGTGAAATACTACCTGAATTGAAAAAGAAACAAATATCTTCAAGGCATGAAGAAAATGCAACAATTTACAGAGGAATTAGGGGAATAAAAGAAGTTTATAATATAATGATAAATGGTAAAGGAAAGGAATATTTAACTTTTGGTGGAGGACCTCCAACTGAAAAACTTTTGGGTTTAACATGGTGGTTGAATTTGCATAATAAAAGAATTGCAAATAAACTACCTTCAAGACAAGTATTTGACGATTCTGTTAAAAATATTGGTGGTAAAGATATTCAAAAGAAAAAATTAACACATATAAAATACTTAGCTAAAGAATTTGCCCAATTTCAGGAAACAGTTATAGTTGGAGATTATGTTGCGATAGCTGTCTTCACAGAAAATCCTTACGCTTTTCTAATAAAAGATAAATATGTCGCAGAAGGATATAGGAAACACTTCGAAGTTTTATGGAAACAGGCTAAGAAATAA
PROTEIN sequence
Length: 244
MNETILEDLGLTSGEIKVYLSLLEIGSSSAGPIIEKSKLQHSVVHRALNSLINKGLVSYILEGKRKIYQASNPENFYNFIEEKKEKFSEILPELKKKQISSRHEENATIYRGIRGIKEVYNIMINGKGKEYLTFGGGPPTEKLLGLTWWLNLHNKRIANKLPSRQVFDDSVKNIGGKDIQKKKLTHIKYLAKEFAQFQETVIVGDYVAIAVFTENPYAFLIKDKYVAEGYRKHFEVLWKQAKK*