ggKbase home page

rifcsphigho2_01_scaffold_24707_5

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_34_23

partial RP 31 / 55 MC: 6 BSCG 19 / 51 MC: 1 ASCG 27 / 38
Location: comp(4459..7707)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit B; K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 999.99
  • Bit_score: 1600
  • Evalue 0.0
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 999.99
  • Bit_score: 925
  • Evalue 1.50e-266
DNA-directed RNA polymerase n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HNZ3_THES4 similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 999.99
  • Bit_score: 925
  • Evalue 5.30e-266

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 3249
ATGAGTGCAGATAAACATATTCTGATTAAGAAATATTTACAGCAGCACTCACTTGTCGAATCCAGCATTAAGAGCTTTAACGATTTTGTTTCACGACGTATGCAACAGATTGTTTATGAATTAAATGATACAATTCCTCAAGAAGAAGTTAAAATAAAATTTGGAAAAATACGAATAGCAAAACCAAATGTAACTGAATCTGATGGAAGCATTTCTATGATAAGTCCTGCTGAGGCACGTTTGAGAAAGTTAACTTATTCTGCTCCTATATATGTTGAAATTACTGTTAATTTTGGAAATAACTCTGATAGCGCCGAGGTAGAGATAGGTAGAATTCCTGTAATTGTTAAGAGCGATACATGTAATACTCATGGAATGGGAAGAGATGAATTGAGAGATACATTCATGGATCCTTTAGACCCTGGGGGATATTTTGTAGTTAATGGAAATGAAAGAGTAATTGTAATGGCAGAAGATTTAGCACCAAATCAACCATTTATTGAAGAAGGTCGAAGAGGATTGTCTTTACGTATGTTTTCTCAACGTGGACCTTATAGAATACCTACAACAATTTCTGAAACTGCAGATGGAATTTTGGAAACTACATTTTCAAGATTGAAAAATATTCCAGCCATAGTTATAATTAAGGCTCTTGGAATGTTAACTGAATCTGAAATTGCAAAACACATTGGAAGACAAGATGATACTGTAATTGTTAATTTGTATGAATATGCGAAGATACAACAACCTAAAGATGCTTACATGATGATTGCTGAGCTTTCTGGAATTCAAGGAACTGAAAAAGAGATTCTAGATCGAGTTAAACAGAGAATTGATTCTTATTTCCTTCCACATATTGGATTGACTAAAGAATCTAGAATTGATAAGGCAATTAATTTGTGTAAAATGCTTAAACAATTTTTACAAGCAAAACAGGACGATGGACTTAGAACTGATAAAGACCATTATGCAAATAAACGCATAAAGCTTTCAGGAGATTTACTTGCAGATCTGTTCAGAGTTAATATGAATATACTTGTAAAAGATATTCAATATACTTTGCAAAAAGTTGCAAAGAGAAAGAAGTTTTATTCTGTTAAGACCGTAGCTAAATCTACTTTGTTTACTCATAGAGTTGAAAGTGCAATTGCTACGGGTGCATGGATTGGAGAAAGAAGCGGAGTTACTCAAAACATGTCAAAGAATAATTATTTGGATATGCTTTCTTCGTTGCAGAGAGTTTCTTCAATGTTGCCTGATGAACAAGAGAATTTCATGGCGCGTACTTTGCACCCTACACATTATGGAAGATTCTGTCCAACTGAGACGCCAGAAGGAACTGAAATTGGGTTGAGAAAAAATTTAGCTATACTTTCTCGTATTTCTAATGCTATTGAATTTGATGAAAAAGCTACTGTCAAACAATTACAAGCTCTTGGACTAAATGAAGAAAGCGGAAAAGATGTATTCTTTAATGGAAAGTATATTGGCATGGCTAAAGATACTTATAATTTTGTGAATTCAGTTCGCGCTGAAAGAAGAAGAGGTATTTTCCCAAGTGAGCTGAGTATTGCTAGTGATAGTCCTGCTAAGACTGTAGTTATTTCTACTGAAGTTGGAAGAGTTTTAAGACCTTTGATAGTTGTTGAGCATGGAGCTAGCAGACTTAAAGATGAACATTTAGTTTTACTTGAACAAGGCTCTTTGAATTGGAGAGAATTAGTTAAAGAAGGAGTTATAGAATACATAGACGCTGCTGAAGAGGAAGATGCTTATGTTGCGCAGTCTCCTGAATCTATAAACGACAAACACACACATGTAGAGATAGATCCTGTTGCTATATTTGGTCTAGTAACTTCACTTGTGCCTTTTGCAAATCATGACCAGTCATCTCGTTTATTGAGAGGAAGTAAAACTTTGCGTCAGTCTCTTGGGCTATATGCAGCTAACTATTTAGTTAGATTGGATACTAACTCATCTATATTACATTATCCACAAAATCCAATTGTAAAGAGTTTTGTATTTGATACGCTTAAGTTATATCCTGCTGGACAGAATATTGTCGTCGCTGTCATGCCTTATGAAGGTTATAATTTAGAAGACGCCACTATATTGAACAGAGCAAGTGTAGAGAGGGGATTGGGAAGAAGCACTTACTTTAAACCTTATGAGTCTGTTGAATTTAATTATGCTGGCGGTCTTAAGGATGAGATTACTATTCCAGATAAGGATGTTTCAGGATATAGAACCGAGACATCTTATAGATTCCTTGAAGATGATGGGATAGTTTATCCTGAAGCTCAATTATCCTCTAGTGAAGTTATTATTGGAAGGACGACACCACCTAAGTTCTTATCTGAAGCAAGAAACTTAAGTATACAGTCAAAGAAAGAAGGAAGCGTTGCGATTAAACAGGGCGAGTCTGGAATTGTTGACAGCGTATTTATTACTGTAGATAGCGAAGGAAATAAAATTGCTAGAATTAGAGTTAGAGACCATAGGATTCCTGAGCCAGGAGATAAATTTTCTACACCTCACGGACAGAAAGGAGTTGTTGGTTTGTTAGCAGATCCTAAAGATATTCCATTTACATCTAAAGGAGTTAAGCCAGATTTGATTTTCAACCCTCACGGAATTCCTTCAAGAATGACTGTTGGTTATATGATTGAAGTTCTTGCTGGAAAAGTTGGAGCAATTACTGGAAGCTTTATAGACGGAACTCCATTTACTGGTGCTAAGGTTGAAGATTTGGAGAAACAATTAATTCATACTGGATTCAGTTATGATGGTAAGGAAGAAATGTATGATGGAGTTACTGGTCGTAAAATGGATGCTAGAATTTATGTAGGTAATATGTATTATCTGAAGCTTGTGCATATGGTTAAGAACAAATTGCAGGCGCGTGCTTCAGGTAAAGTTACATTATTGACTAGACAGCCGGTTGAGGGAAGATCTCGTGGTGGTGCTTTGCGTTTGGGAGAAATGGAACAGCAAGCTCTTGTGGCTCACGGAGCGTCGTTATTGTTGAAAGAAAGATATGATTCGGATAAAACGACAATTTATATCTGCTCATCTTGTGGAAATATTGGAATAAAAGATGGAATAAGAAATAAGACATATTGTCCTATATGTGGTGGAGCTGATATTGAGCCAATTGAAGTTGCATATGCATTTAAACTATTGATAGAAGAGTTATTAGGATTACATATATTAACAAGCTTTGAACTAAAGAATAAATATGAACAATAA
PROTEIN sequence
Length: 1083
MSADKHILIKKYLQQHSLVESSIKSFNDFVSRRMQQIVYELNDTIPQEEVKIKFGKIRIAKPNVTESDGSISMISPAEARLRKLTYSAPIYVEITVNFGNNSDSAEVEIGRIPVIVKSDTCNTHGMGRDELRDTFMDPLDPGGYFVVNGNERVIVMAEDLAPNQPFIEEGRRGLSLRMFSQRGPYRIPTTISETADGILETTFSRLKNIPAIVIIKALGMLTESEIAKHIGRQDDTVIVNLYEYAKIQQPKDAYMMIAELSGIQGTEKEILDRVKQRIDSYFLPHIGLTKESRIDKAINLCKMLKQFLQAKQDDGLRTDKDHYANKRIKLSGDLLADLFRVNMNILVKDIQYTLQKVAKRKKFYSVKTVAKSTLFTHRVESAIATGAWIGERSGVTQNMSKNNYLDMLSSLQRVSSMLPDEQENFMARTLHPTHYGRFCPTETPEGTEIGLRKNLAILSRISNAIEFDEKATVKQLQALGLNEESGKDVFFNGKYIGMAKDTYNFVNSVRAERRRGIFPSELSIASDSPAKTVVISTEVGRVLRPLIVVEHGASRLKDEHLVLLEQGSLNWRELVKEGVIEYIDAAEEEDAYVAQSPESINDKHTHVEIDPVAIFGLVTSLVPFANHDQSSRLLRGSKTLRQSLGLYAANYLVRLDTNSSILHYPQNPIVKSFVFDTLKLYPAGQNIVVAVMPYEGYNLEDATILNRASVERGLGRSTYFKPYESVEFNYAGGLKDEITIPDKDVSGYRTETSYRFLEDDGIVYPEAQLSSSEVIIGRTTPPKFLSEARNLSIQSKKEGSVAIKQGESGIVDSVFITVDSEGNKIARIRVRDHRIPEPGDKFSTPHGQKGVVGLLADPKDIPFTSKGVKPDLIFNPHGIPSRMTVGYMIEVLAGKVGAITGSFIDGTPFTGAKVEDLEKQLIHTGFSYDGKEEMYDGVTGRKMDARIYVGNMYYLKLVHMVKNKLQARASGKVTLLTRQPVEGRSRGGALRLGEMEQQALVAHGASLLLKERYDSDKTTIYICSSCGNIGIKDGIRNKTYCPICGGADIEPIEVAYAFKLLIEELLGLHILTSFELKNKYEQ*