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rifcsphigho2_01_scaffold_12835_6

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_37_14

partial RP 30 / 55 MC: 5 BSCG 17 / 51 MC: 1 ASCG 26 / 38
Location: comp(3943..4821)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1K5_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 273.0
  • Bit_score: 142
  • Evalue 7.90e-31
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 273.0
  • Bit_score: 142
  • Evalue 2.20e-31
RNA polymerase sigma factor Tax=GWA1_OP11_37_7 similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 279.0
  • Bit_score: 142
  • Evalue 8.50e-31

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Taxonomy

GWA1_OP11_37_7 → Woesebacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 879
ATGACTAAAGCAAAACACCATAATAACAATGGAAGAAGTTATAATGAGCCTAACCCTGAATTTGGCTCTTATCTTAAAATTAAGAGCAAATTTCCTGTTCTTGACATGGAAAGAACTGCCGAACTGACATACGCTGCCAGACGGGGATGTAAAGACTCTTTAGACACTTTAGTATGCTCAAATATAGGGCTTGTTCTAAGAAATGCGCTGAAAATGTTTAAGAGGGGCAGAGGGCTGGAGATAATGGATGTAGTGCAGAACGGAATGGACGGGCTTTTAAGGGCTATAGAGGGATATGACCCCTCTTTAGGATATAAATTCAGCACCTATGCCACATGGTGGATAAAGCAGGCAATCCAAAGGGGATATATAGACCAGGGAAGAGCAATCAGAATTCCTGCGCACACAAATGAAAGGCTCGTCGCGTATATGAAAGAAAAATCTCTGGAGAAATCAGATAAACCAAGGAAAGCCGGAAGCGCAGAGGAAGGCAGCGTAAGAGAAGATGAAATTGTAAGAGATGCATTAAAAGTTTTGAACGTTCATTCCCTGTATTCCACAATGAATGACTGGCATGGAGAAGAGTCATCAGAGCTTATTGAATCTATAGAATCTCCAGATAATACAAGAGCAGAGTGTGATTTAGGGGAAGCAATTGACTCTGCACTCGACAAGCTGCCTGAAAGAGAGAGAATGGTCATTCAGTGCAGGTTCTTCAACGGAATGAGCCTTGAAGAAACCAGAAATGTATTGTTCAATACAGGCAGTATCGGCGGGAAGAAGACTGCAAGAGAAGCTATCAGAAGGATTGAAGATAGAGCCCTTAAGAGGCTGCGCTGCCGCCTCAAGCCTTATGAAGAATATGCTGTGGCGGAGTGA
PROTEIN sequence
Length: 293
MTKAKHHNNNGRSYNEPNPEFGSYLKIKSKFPVLDMERTAELTYAARRGCKDSLDTLVCSNIGLVLRNALKMFKRGRGLEIMDVVQNGMDGLLRAIEGYDPSLGYKFSTYATWWIKQAIQRGYIDQGRAIRIPAHTNERLVAYMKEKSLEKSDKPRKAGSAEEGSVREDEIVRDALKVLNVHSLYSTMNDWHGEESSELIESIESPDNTRAECDLGEAIDSALDKLPERERMVIQCRFFNGMSLEETRNVLFNTGSIGGKKTAREAIRRIEDRALKRLRCRLKPYEEYAVAE*